RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 RPL32P62910 135 aaKnown RBP12.78□□□□□ -0.36
CCDC7-203ENST00000362006 Q6ZSN1 163 aa12.78□□□□□ -0.36
CCDC7-203ENST00000362006 ATP5G1P05496 136 aa12.77□□□□□ -0.36
CCDC7-203ENST00000362006 PMCHP20382 165 aa12.77□□□□□ -0.36
CCDC7-203ENST00000362006 FHL2Q14192 279 aa12.77□□□□□ -0.36
CCDC7-203ENST00000362006 NIT1Q86X76 327 aa12.77□□□□□ -0.36
CCDC7-203ENST00000362006 CHCHD1Q96BP2 118 aaKnown RBP12.77□□□□□ -0.36
CCDC7-203ENST00000362006 A0A0J9YWU9 116 aa12.77□□□□□ -0.37
CCDC7-203ENST00000362006 LOC389332A0A1B0GUA5 103 aa12.77□□□□□ -0.37
CCDC7-203ENST00000362006 C5orf52A6NGY3 159 aa12.77□□□□□ -0.37
CCDC7-203ENST00000362006 K7EQD1 137 aa12.77□□□□□ -0.37
CCDC7-203ENST00000362006 LINC00614P0C842 121 aa12.77□□□□□ -0.37
CCDC7-203ENST00000362006 NHLRC4P0CG21 123 aaPredicted RBP12.77□□□□□ -0.37
CCDC7-203ENST00000362006 DEFA6Q01524 100 aa12.77□□□□□ -0.37
CCDC7-203ENST00000362006 SNRPEP62304 92 aaKnown RBP12.76□□□□□ -0.37
CCDC7-203ENST00000362006 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
CCDC7-203ENST00000362006 Q8N8P6 123 aa12.76□□□□□ -0.37
CCDC7-203ENST00000362006 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
CCDC7-203ENST00000362006 SERF1AO75920 110 aa12.76□□□□□ -0.37
CCDC7-203ENST00000362006 ESDP10768 282 aa12.76□□□□□ -0.37
CCDC7-203ENST00000362006 HOXA5P20719 270 aa12.76□□□□□ -0.37
CCDC7-203ENST00000362006 IFI27P40305 119 aaPredicted RBP12.75□□□□□ -0.37
CCDC7-203ENST00000362006 RHOHQ15669 191 aa12.75□□□□□ -0.37
CCDC7-203ENST00000362006 SLC25A29Q8N8R3 303 aa12.75□□□□□ -0.37
CCDC7-203ENST00000362006 SMIM2Q9BVW6 85 aa12.75□□□□□ -0.37
CCDC7-203ENST00000362006 VCYO14598 125 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
CCDC7-203ENST00000362006 PRADC1Q9BSG0 188 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 HHLA3Q9XRX5 114 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 K7EMI3 77 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 C12orf74Q32Q52 190 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 RNASEKQ6P5S7 137 aaKnown RBP12.74□□□□□ -0.37
CCDC7-203ENST00000362006 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 TMEM70Q9BUB7 260 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 AP5S1Q9NUS5 200 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
CCDC7-203ENST00000362006 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
CCDC7-203ENST00000362006 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
CCDC7-203ENST00000362006 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
CCDC7-203ENST00000362006 IGLV2-18A0A075B6J9 118 aa12.73□□□□□ -0.37
CCDC7-203ENST00000362006 LINC01546A6NGU7 62 aa12.73□□□□□ -0.37
CCDC7-203ENST00000362006 URB1-AS1Q96HZ7 61 aa12.73□□□□□ -0.37
CCDC7-203ENST00000362006 TRBV27A0A0K0K1C4 114 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 TCAPO15273 167 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 HSBP1O75506 76 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 P0DMU3 169 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 LINC00310P59036 64 aa12.72□□□□□ -0.37
CCDC7-203ENST00000362006 TRBV7-3A0A075B6L6 115 aa12.71□□□□□ -0.37
CCDC7-203ENST00000362006 CRYBA4P53673 196 aa12.71□□□□□ -0.38
CCDC7-203ENST00000362006 KIR2DL4Q99706 377 aa12.71□□□□□ -0.38
CCDC7-203ENST00000362006 NUPR1O60356 82 aa12.7□□□□□ -0.38
CCDC7-203ENST00000362006 S100A2P29034 98 aa12.7□□□□□ -0.38
CCDC7-203ENST00000362006 HIST3H2BBQ8N257 126 aa12.7□□□□□ -0.38
CCDC7-203ENST00000362006 I3L3M4 83 aa12.7□□□□□ -0.38
CCDC7-203ENST00000362006 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
CCDC7-203ENST00000362006 F5H768 121 aa12.69□□□□□ -0.38
CCDC7-203ENST00000362006 PAX4O43316 350 aa12.68□□□□□ -0.38
CCDC7-203ENST00000362006 LAGE3Q14657 143 aa12.68□□□□□ -0.38
CCDC7-203ENST00000362006 ORMDL2Q53FV1 153 aa12.68□□□□□ -0.38
CCDC7-203ENST00000362006 PACRGQ96M98 296 aaPredicted RBP12.68□□□□□ -0.38
CCDC7-203ENST00000362006 DAZ4Q86SG3 579 aaKnown RBP12.68□□□□□ -0.38
CCDC7-203ENST00000362006 TMEM18Q96B42 140 aa12.68□□□□□ -0.38
CCDC7-203ENST00000362006 DAZ3Q9NR90 486 aaKnown RBP12.68□□□□□ -0.38
CCDC7-203ENST00000362006 Q9UF83 564 aa12.68□□□□□ -0.38
CCDC7-203ENST00000362006 TENM3Q9P273 2699 aa12.67□□□□□ -0.38
CCDC7-203ENST00000362006 G0S2P27469 103 aa12.67□□□□□ -0.38
CCDC7-203ENST00000362006 HTN3P15516 51 aa12.67□□□□□ -0.38
CCDC7-203ENST00000362006 UBE2D3P61077 147 aa12.67□□□□□ -0.38
CCDC7-203ENST00000362006 UBE2D2P62837 147 aa12.67□□□□□ -0.38
CCDC7-203ENST00000362006 PDZD11Q5EBL8 140 aa12.67□□□□□ -0.38
CCDC7-203ENST00000362006 GAGE12JA6NER3 117 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 FCER1GP30273 86 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 AMTP48728 403 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
CCDC7-203ENST00000362006 GAGE1Q13065 139 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 GAGE4Q13068 117 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 GAGE5Q13069 117 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 GAGE13Q4V321 117 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 Q6ZTC4 211 aa12.66□□□□□ -0.38
CCDC7-203ENST00000362006 GYPEP15421 78 aa12.65□□□□□ -0.38
CCDC7-203ENST00000362006 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.38
CCDC7-203ENST00000362006 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 H3BNG1 76 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 FAM19A2Q8N3H0 131 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 TRAV26-1A0A087WT03 109 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 LINC01549A6NIU2 74 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 HBDP02042 147 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 LINC00694P0DN24 101 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 COTL1Q14019 142 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 VSIG2Q96IQ7 327 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 HIST1H2BLQ99880 126 aa12.64□□□□□ -0.39
CCDC7-203ENST00000362006 HUWE1Q7Z6Z7 4374 aaKnown RBP12.64□□□□□ -0.39
CCDC7-203ENST00000362006 LOC100131303A0A0U1RQF7 123 aa12.63□□□□□ -0.39
CCDC7-203ENST00000362006 NUDT3O95989 172 aa12.63□□□□□ -0.39
CCDC7-203ENST00000362006 TSHBP01222 138 aa12.63□□□□□ -0.39
CCDC7-203ENST00000362006 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
CCDC7-203ENST00000362006 TRAV10A0A0B4J240 114 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms