RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 NOTCH4Q99466 2003 aa11.32□□□□□ -0.6
COL11A2-202ENST00000361917 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 ODF1Q14990 250 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 TAX1BP3O14907 124 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
COL11A2-202ENST00000361917 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 PLA2G5P39877 138 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 TRBV10-2A0A0K0K1G8 114 aa11.31□□□□□ -0.6
COL11A2-202ENST00000361917 PRO0255Q9UI72 69 aa11.3□□□□□ -0.6
COL11A2-202ENST00000361917 JMJD7-PLA2G4BH0Y9G9 81 aa11.3□□□□□ -0.6
COL11A2-202ENST00000361917 LYPD6Q86Y78 171 aa11.3□□□□□ -0.6
COL11A2-202ENST00000361917 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
COL11A2-202ENST00000361917 LINC01548A6NM66 108 aa11.3□□□□□ -0.6
COL11A2-202ENST00000361917 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
COL11A2-202ENST00000361917 IGKV2D-26A0A0A0MRZ7 120 aa11.29□□□□□ -0.6
COL11A2-202ENST00000361917 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
COL11A2-202ENST00000361917 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
COL11A2-202ENST00000361917 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
COL11A2-202ENST00000361917 COX7BP24311 80 aa11.29□□□□□ -0.6
COL11A2-202ENST00000361917 FOXI1Q12951 378 aa11.29□□□□□ -0.6
COL11A2-202ENST00000361917 RIF1Q5UIP0 2472 aaKnown RBP11.29□□□□□ -0.6
COL11A2-202ENST00000361917 RNF183Q96D59 192 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
COL11A2-202ENST00000361917 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 CRYGBP07316 175 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 LOXL1Q08397 574 aaPredicted RBP11.28□□□□□ -0.6
COL11A2-202ENST00000361917 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
COL11A2-202ENST00000361917 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.6
COL11A2-202ENST00000361917 Q6ZTI0 123 aa11.27□□□□□ -0.61
COL11A2-202ENST00000361917 Q8NA96 180 aa11.27□□□□□ -0.61
COL11A2-202ENST00000361917 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.61
COL11A2-202ENST00000361917 PLXNB3Q9ULL4 1909 aa11.26□□□□□ -0.61
COL11A2-202ENST00000361917 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
COL11A2-202ENST00000361917 PTH2Q96A98 100 aa11.26□□□□□ -0.61
COL11A2-202ENST00000361917 GTF3C1Q12789 2109 aa11.25□□□□□ -0.61
COL11A2-202ENST00000361917 C19orf84I3L1E1 186 aa11.25□□□□□ -0.61
COL11A2-202ENST00000361917 INSL3P51460 131 aa11.25□□□□□ -0.61
COL11A2-202ENST00000361917 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
COL11A2-202ENST00000361917 GPR179Q6PRD1 2367 aa11.25□□□□□ -0.61
COL11A2-202ENST00000361917 MIAQ16674 131 aa11.25□□□□□ -0.61
COL11A2-202ENST00000361917 REG3AQ06141 175 aa11.24□□□□□ -0.61
COL11A2-202ENST00000361917 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
COL11A2-202ENST00000361917 SPRY4Q9C004 299 aa11.24□□□□□ -0.61
COL11A2-202ENST00000361917 TNRC6AQ8NDV7 1962 aaKnown RBP11.24□□□□□ -0.61
COL11A2-202ENST00000361917 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
COL11A2-202ENST00000361917 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
COL11A2-202ENST00000361917 HIGD2AQ9BW72 106 aa11.23□□□□□ -0.61
COL11A2-202ENST00000361917 ODF3BA8MYP8 253 aa11.23□□□□□ -0.61
COL11A2-202ENST00000361917 MED13Q9UHV7 2174 aa11.23□□□□□ -0.61
COL11A2-202ENST00000361917 TNFRSF13BO14836 293 aaPredicted RBP11.23□□□□□ -0.61
COL11A2-202ENST00000361917 IGKV4-1P06312 121 aa11.23□□□□□ -0.61
COL11A2-202ENST00000361917 A0A096LNI7 61 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 TRBV10-1A0A0K0K1A3 114 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 LRCOL1A6NCL2 159 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 TCL1BO95988 128 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 FAM222AQ5U5X8 452 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 H3BT86 120 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 LINC00467Q9BRT7 94 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 SVIPQ8NHG7 77 aa11.22□□□□□ -0.61
COL11A2-202ENST00000361917 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.61
COL11A2-202ENST00000361917 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
COL11A2-202ENST00000361917 ADAMTS9Q9P2N4 1935 aa11.21□□□□□ -0.61
COL11A2-202ENST00000361917 G3V4G9 280 aa11.21□□□□□ -0.61
COL11A2-202ENST00000361917 NDUFC2O95298 119 aa11.21□□□□□ -0.61
COL11A2-202ENST00000361917 IGHV4-31P0DP07 118 aa11.21□□□□□ -0.61
COL11A2-202ENST00000361917 ZGRF1Q86YA3 2104 aa11.21□□□□□ -0.62
COL11A2-202ENST00000361917 LMO4P61968 165 aa11.21□□□□□ -0.62
COL11A2-202ENST00000361917 FBXL19-AS1Q494R0 122 aa11.21□□□□□ -0.62
COL11A2-202ENST00000361917 CRYGDP07320 174 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
COL11A2-202ENST00000361917 OBSL1O75147 1896 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 TRAV23DV6A0A075B6W5 121 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 IGF1P05019 195 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 Q6YL49 198 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 UPK3BQ9BT76 320 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 SEC61GP60059 68 aa11.2□□□□□ -0.62
COL11A2-202ENST00000361917 J3KT08 172 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 ARHGAP21Q5T5U3 1957 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 UFSP1Q6NVU6 142 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
COL11A2-202ENST00000361917 DENND4AQ7Z401 1863 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
COL11A2-202ENST00000361917 IGLV2-8P01709 118 aa11.18□□□□□ -0.62
COL11A2-202ENST00000361917 C14orf177Q52M58 125 aa11.18□□□□□ -0.62
COL11A2-202ENST00000361917 A0A1B0GXF2 115 aa11.18□□□□□ -0.62
COL11A2-202ENST00000361917 SPTAN1Q13813 2472 aaKnown RBP11.18□□□□□ -0.62
COL11A2-202ENST00000361917 NACAE9PAV3 2078 aa11.18□□□□□ -0.62
COL11A2-202ENST00000361917 INAFM1C9JVW0 142 aa11.17□□□□□ -0.62
COL11A2-202ENST00000361917 BRK1Q8WUW1 75 aa11.17□□□□□ -0.62
COL11A2-202ENST00000361917 BPY2O14599 106 aa11.17□□□□□ -0.62
COL11A2-202ENST00000361917 SLPIP03973 132 aa11.17□□□□□ -0.62
COL11A2-202ENST00000361917 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms