RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 F8W1H4 67 aa14.12□□□□□ -0.15
CLIP2-202ENST00000361545 INAFM2P0DMQ5 153 aa14.12□□□□□ -0.15
CLIP2-202ENST00000361545 CRIP3Q6Q6R5 217 aa14.12□□□□□ -0.15
CLIP2-202ENST00000361545 P0C879 139 aa14.12□□□□□ -0.15
CLIP2-202ENST00000361545 HAMPP81172 84 aa14.12□□□□□ -0.15
CLIP2-202ENST00000361545 PPDPFLQ8WWR9 84 aa14.12□□□□□ -0.15
CLIP2-202ENST00000361545 TIRAPP58753 221 aa14.11□□□□□ -0.15
CLIP2-202ENST00000361545 LINC00173Q6ZV60 143 aa14.11□□□□□ -0.15
CLIP2-202ENST00000361545 PRRC2AP48634 2157 aaKnown RBP14.11□□□□□ -0.15
CLIP2-202ENST00000361545 A0A1W2PPM0 123 aa14.11□□□□□ -0.15
CLIP2-202ENST00000361545 C11orf45Q8TAV5 145 aa14.1□□□□□ -0.15
CLIP2-202ENST00000361545 PRO0255Q9UI72 69 aa14.1□□□□□ -0.15
CLIP2-202ENST00000361545 DSCR8Q96T75 97 aa14.1□□□□□ -0.15
CLIP2-202ENST00000361545 HERV-K104P63124 156 aa14.1□□□□□ -0.15
CLIP2-202ENST00000361545 FSTL3O95633 263 aa14.09□□□□□ -0.15
CLIP2-202ENST00000361545 ALPK3Q96L96 1907 aa14.09□□□□□ -0.15
CLIP2-202ENST00000361545 RBMY1FQ15415 496 aaKnown RBP14.09□□□□□ -0.15
CLIP2-202ENST00000361545 ARHGAP21Q5T5U3 1957 aa14.09□□□□□ -0.15
CLIP2-202ENST00000361545 ETDCA0A1B0GVM5 59 aa14.09□□□□□ -0.15
CLIP2-202ENST00000361545 TINCRA0A1B0GVN0 87 aa14.09□□□□□ -0.15
CLIP2-202ENST00000361545 DEFB114Q30KQ6 69 aa14.09□□□□□ -0.15
CLIP2-202ENST00000361545 CARD19Q96LW7 228 aa14.08□□□□□ -0.15
CLIP2-202ENST00000361545 TP53TG3Q9ULZ0 132 aa14.08□□□□□ -0.15
CLIP2-202ENST00000361545 MYO9AB2RTY4 2548 aa14.08□□□□□ -0.15
CLIP2-202ENST00000361545 PLA2G2AP14555 144 aa14.08□□□□□ -0.16
CLIP2-202ENST00000361545 H3BMG7 143 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 Q6ZTI0 123 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 COX7B2Q8TF08 81 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 CCL25O15444 150 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 LINC00482Q8N8I6 264 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 LY6LH3BQJ8 138 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 CTRLP40313 264 aa14.07□□□□□ -0.16
CLIP2-202ENST00000361545 KIR2DL5BA0A0G2JN68 375 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 KIR2DL5BA0A0G2JPC4 375 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 MED14OSP0DP75 135 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 KIR2DL5AQ8N109 375 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 UBL5Q9BZL1 73 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 ZNF80P51504 273 aaPredicted RBP14.06□□□□□ -0.16
CLIP2-202ENST00000361545 C11orf1Q9H5F2 150 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 TRAV26-1A0A087WT03 109 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 TRAV12-1A0A0B4J245 112 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 NUPR1O60356 82 aa14.06□□□□□ -0.16
CLIP2-202ENST00000361545 FAM110AQ9BQ89 295 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 LGALS9O00182 355 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 SHISA2Q6UWI4 295 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 C12orf74Q32Q52 190 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 DAND5Q8N907 189 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 NDUFA1O15239 70 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 FAM222AQ5U5X8 452 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 SND1-IT1Q9HBX3 110 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 PKIGQ9Y2B9 76 aa14.05□□□□□ -0.16
CLIP2-202ENST00000361545 FRMD6-AS1P0C7T7 363 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 K7EQG2 157 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 IFITM1P13164 125 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 EBI3Q14213 229 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 CFC1BP0CG36 223 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 CFC1P0CG37 223 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 P0DMU3 169 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 FAM231AP0DMU4 169 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 FAM231CP0DMU5 169 aa14.04□□□□□ -0.16
CLIP2-202ENST00000361545 JMJD1CQ15652 2540 aa14.03□□□□□ -0.16
CLIP2-202ENST00000361545 CRYGBP07316 175 aa14.03□□□□□ -0.16
CLIP2-202ENST00000361545 MUC22E2RYF6 1773 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-202ENST00000361545 SIVA1O15304 175 aa14.03□□□□□ -0.16
CLIP2-202ENST00000361545 C10orf142B7Z368 130 aa14.02□□□□□ -0.16
CLIP2-202ENST00000361545 SPAG11BQ08648 103 aa14.02□□□□□ -0.16
CLIP2-202ENST00000361545 CEMP1Q6PRD7 247 aaPredicted RBP14.02□□□□□ -0.17
CLIP2-202ENST00000361545 PRSS47A8MTI9 375 aa14.02□□□□□ -0.17
CLIP2-202ENST00000361545 BAALCQ8WXS3 180 aa14.02□□□□□ -0.17
CLIP2-202ENST00000361545 CEP295Q9C0D2 2601 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 COA6Q5JTJ3 125 aaKnown RBP14.01□□□□□ -0.17
CLIP2-202ENST00000361545 OPRPNQ99935 248 aaPredicted RBP14.01□□□□□ -0.17
CLIP2-202ENST00000361545 hADV29S1A0JD25 119 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 C20orf173Q96LM9 149 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 DOPEY1Q5JWR5 2465 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 TRBV6-1A0A0K0K1D8 114 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 C19orf71A6NCJ1 209 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 ANKRD39Q53RE8 183 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 RNASE8Q8TDE3 154 aaKnown RBP14.01□□□□□ -0.17
CLIP2-202ENST00000361545 TIMM17AQ99595 171 aa14.01□□□□□ -0.17
CLIP2-202ENST00000361545 LINC01006Q8NI28 216 aa14□□□□□ -0.17
CLIP2-202ENST00000361545 TOMM6Q96B49 74 aa14□□□□□ -0.17
CLIP2-202ENST00000361545 MUSTN1Q8IVN3 82 aa14□□□□□ -0.17
CLIP2-202ENST00000361545 TTTY13Q9BZ97 58 aa14□□□□□ -0.17
CLIP2-202ENST00000361545 KRTAP10-9P60411 292 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 EIF4EBP1Q13541 118 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-202ENST00000361545 IL17DQ8TAD2 202 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 ZNF702PQ9H963 129 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 NUP210LQ5VU65 1888 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 NCR3O14931 201 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 C2CD3Q4AC94 2353 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 PLXNB1O43157 2135 aa13.99□□□□□ -0.17
CLIP2-202ENST00000361545 LINC00322Q6ZN03 302 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-202ENST00000361545 SMR3AQ99954 134 aa13.98□□□□□ -0.17
CLIP2-202ENST00000361545 TDRG1Q3Y452 100 aa13.98□□□□□ -0.17
CLIP2-202ENST00000361545 TRBV10-1A0A0K0K1A3 114 aa13.98□□□□□ -0.17
CLIP2-202ENST00000361545 B5MCH6 92 aa13.98□□□□□ -0.17
CLIP2-202ENST00000361545 ZNF295-AS1Q8N0V1 137 aa13.98□□□□□ -0.17
CLIP2-202ENST00000361545 ORMDL1Q9P0S3 153 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms