RNA–Protein interactions for RNA: ENST00000359354.6

FGFR2-207, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-207ENST00000359354 GAGE1Q13065 139 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 GAGE4Q13068 117 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 GAGE5Q13069 117 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
FGFR2-207ENST00000359354 GAGE13Q4V321 117 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 TMEM136Q6ZRR5 245 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 SRIP30626 198 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 RPL36AP83881 106 aaKnown RBP11.49□□□□□ -0.57
FGFR2-207ENST00000359354 NEXN-AS1Q8NBZ9 246 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 ZNRF2Q8NHG8 242 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 RPL36ALQ969Q0 106 aaKnown RBP11.49□□□□□ -0.57
FGFR2-207ENST00000359354 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
FGFR2-207ENST00000359354 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
FGFR2-207ENST00000359354 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
FGFR2-207ENST00000359354 FRZBQ92765 325 aa11.48□□□□□ -0.57
FGFR2-207ENST00000359354 GNB1LQ9BYB4 327 aa11.48□□□□□ -0.57
FGFR2-207ENST00000359354 SMKR1H3BMG3 65 aa11.47□□□□□ -0.57
FGFR2-207ENST00000359354 NCR2O95944 276 aa11.47□□□□□ -0.57
FGFR2-207ENST00000359354 COX19Q49B96 90 aa11.47□□□□□ -0.57
FGFR2-207ENST00000359354 NIT2Q9NQR4 276 aa11.47□□□□□ -0.57
FGFR2-207ENST00000359354 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
FGFR2-207ENST00000359354 CKS2P33552 79 aa11.46□□□□□ -0.57
FGFR2-207ENST00000359354 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.57
FGFR2-207ENST00000359354 RPL39LQ96EH5 51 aaKnown RBP11.46□□□□□ -0.57
FGFR2-207ENST00000359354 HLA-DQA1P01909 254 aa11.46□□□□□ -0.58
FGFR2-207ENST00000359354 LINC00694P0DN24 101 aa11.46□□□□□ -0.58
FGFR2-207ENST00000359354 SH2D6Q7Z4S9 175 aa11.46□□□□□ -0.58
FGFR2-207ENST00000359354 D6R8Y8 96 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 APCSP02743 223 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
FGFR2-207ENST00000359354 UBE2D3P61077 147 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 UBE2D2P62837 147 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
FGFR2-207ENST00000359354 PPBPP02775 128 aa11.44□□□□□ -0.58
FGFR2-207ENST00000359354 MT-ND6P03923 174 aa11.44□□□□□ -0.58
FGFR2-207ENST00000359354 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
FGFR2-207ENST00000359354 PPP1R17O96001 155 aa11.43□□□□□ -0.58
FGFR2-207ENST00000359354 ESRGQ1W209 222 aa11.43□□□□□ -0.58
FGFR2-207ENST00000359354 NRACQ8N912 160 aa11.43□□□□□ -0.58
FGFR2-207ENST00000359354 MRPL18Q9H0U6 180 aaKnown RBP11.43□□□□□ -0.58
FGFR2-207ENST00000359354 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 FABP9Q0Z7S8 132 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 PRELID3AQ96N28 172 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 GTSF1LQ9H1H1 148 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 TRAPPC1Q9Y5R8 145 aa11.42□□□□□ -0.58
FGFR2-207ENST00000359354 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
FGFR2-207ENST00000359354 COLCA2A8K830 154 aa11.41□□□□□ -0.58
FGFR2-207ENST00000359354 CCL18P55774 89 aa11.41□□□□□ -0.58
FGFR2-207ENST00000359354 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
FGFR2-207ENST00000359354 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.41□□□□□ -0.58
FGFR2-207ENST00000359354 ST20Q9HBF5 79 aa11.41□□□□□ -0.58
FGFR2-207ENST00000359354 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
FGFR2-207ENST00000359354 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
FGFR2-207ENST00000359354 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
FGFR2-207ENST00000359354 NPYP01303 97 aa11.4□□□□□ -0.59
FGFR2-207ENST00000359354 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
FGFR2-207ENST00000359354 TMEM70Q9BUB7 260 aa11.39□□□□□ -0.59
FGFR2-207ENST00000359354 LINC00588Q9Y4M8 146 aa11.39□□□□□ -0.59
FGFR2-207ENST00000359354 PHOX2AO14813 284 aa11.38□□□□□ -0.59
FGFR2-207ENST00000359354 UBE2DNLQ8IWF7 75 aa11.38□□□□□ -0.59
FGFR2-207ENST00000359354 DEFB104AQ8WTQ1 72 aa11.38□□□□□ -0.59
FGFR2-207ENST00000359354 C20orf78Q9BR46 151 aa11.38□□□□□ -0.59
FGFR2-207ENST00000359354 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
FGFR2-207ENST00000359354 RAB5AP20339 215 aa11.37□□□□□ -0.59
FGFR2-207ENST00000359354 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
FGFR2-207ENST00000359354 TIRAPP58753 221 aa11.37□□□□□ -0.59
FGFR2-207ENST00000359354 PMCHP20382 165 aa11.36□□□□□ -0.59
FGFR2-207ENST00000359354 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
FGFR2-207ENST00000359354 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
FGFR2-207ENST00000359354 I3L3M4 83 aa11.36□□□□□ -0.59
FGFR2-207ENST00000359354 COTL1Q14019 142 aa11.36□□□□□ -0.59
FGFR2-207ENST00000359354 LELP1Q5T871 98 aa11.36□□□□□ -0.59
FGFR2-207ENST00000359354 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
FGFR2-207ENST00000359354 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
FGFR2-207ENST00000359354 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
FGFR2-207ENST00000359354 VCYO14598 125 aa11.35□□□□□ -0.59
FGFR2-207ENST00000359354 LY6G6CO95867 125 aa11.35□□□□□ -0.59
FGFR2-207ENST00000359354 NTM-AS1Q6ZSK4 140 aa11.35□□□□□ -0.59
FGFR2-207ENST00000359354 VPS13DQ5THJ4 4388 aa11.35□□□□□ -0.59
FGFR2-207ENST00000359354 LOC389332A0A1B0GUA5 103 aa11.34□□□□□ -0.59
FGFR2-207ENST00000359354 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
FGFR2-207ENST00000359354 LINC00476Q8WZB0 136 aa11.34□□□□□ -0.59
FGFR2-207ENST00000359354 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
FGFR2-207ENST00000359354 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
FGFR2-207ENST00000359354 DNAH1Q9P2D7 4330 aa11.34□□□□□ -0.59
FGFR2-207ENST00000359354 ALMS1Q8TCU4 4167 aa11.33□□□□□ -0.59
FGFR2-207ENST00000359354 TRGC2P03986 189 aa11.33□□□□□ -0.6
FGFR2-207ENST00000359354 RPL32P62910 135 aaKnown RBP11.33□□□□□ -0.6
FGFR2-207ENST00000359354 KIR2DL4Q99706 377 aa11.33□□□□□ -0.6
FGFR2-207ENST00000359354 TRAV8-6A0A0B4J262 113 aa11.33□□□□□ -0.6
FGFR2-207ENST00000359354 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
FGFR2-207ENST00000359354 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
FGFR2-207ENST00000359354 PRSS47A8MTI9 375 aa11.32□□□□□ -0.6
FGFR2-207ENST00000359354 TSHBP01222 138 aa11.32□□□□□ -0.6
FGFR2-207ENST00000359354 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
FGFR2-207ENST00000359354 AMTP48728 403 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms