RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 OR4C5Q8NGB2 326 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 OR11H2Q8NH07 326 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 RNF183Q96D59 192 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 PACRGQ96M98 296 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 EDA2RQ9HAV5 297 aa9.92□□□□□ -0.82
PDLIM5-203ENST00000359265 TRAV4A0A0B4J268 109 aa9.91□□□□□ -0.82
PDLIM5-203ENST00000359265 K7EIL1 84 aa9.91□□□□□ -0.82
PDLIM5-203ENST00000359265 MIFP14174 115 aa9.91□□□□□ -0.82
PDLIM5-203ENST00000359265 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-203ENST00000359265 UFSP1Q6NVU6 142 aa9.91□□□□□ -0.82
PDLIM5-203ENST00000359265 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
PDLIM5-203ENST00000359265 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 M0QY20 66 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 CIDEAO60543 219 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 GAGE7O76087 117 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 EMP1P54849 157 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 Q8N8P6 123 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 OR10D4PQ8NGN7 298 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 TP53TG1Q9Y2A0 90 aa9.9□□□□□ -0.82
PDLIM5-203ENST00000359265 TRGV2A0A075B6R0 118 aa9.89□□□□□ -0.83
PDLIM5-203ENST00000359265 IGHV3-73A0A0B4J1V6 119 aa9.89□□□□□ -0.83
PDLIM5-203ENST00000359265 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
PDLIM5-203ENST00000359265 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-203ENST00000359265 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
PDLIM5-203ENST00000359265 FAM19A2Q8N3H0 131 aa9.89□□□□□ -0.83
PDLIM5-203ENST00000359265 IGHV4-28A0A0C4DH34 117 aa9.88□□□□□ -0.83
PDLIM5-203ENST00000359265 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
PDLIM5-203ENST00000359265 LYRM9A8MSI8 78 aa9.88□□□□□ -0.83
PDLIM5-203ENST00000359265 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
PDLIM5-203ENST00000359265 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
PDLIM5-203ENST00000359265 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
PDLIM5-203ENST00000359265 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
PDLIM5-203ENST00000359265 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
PDLIM5-203ENST00000359265 K7EMI3 77 aa9.87□□□□□ -0.83
PDLIM5-203ENST00000359265 Q8NAQ8 132 aa9.87□□□□□ -0.83
PDLIM5-203ENST00000359265 PMCHL1Q16048 86 aa9.86□□□□□ -0.83
PDLIM5-203ENST00000359265 ZNF479Q96JC4 524 aa9.86□□□□□ -0.83
PDLIM5-203ENST00000359265 C18orf15Q96N68 181 aa9.86□□□□□ -0.83
PDLIM5-203ENST00000359265 PCLOQ9Y6V0 5065 aa9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 HBDP02042 147 aa9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 FAM222AQ5U5X8 452 aa9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 TMEM70Q9BUB7 260 aa9.85□□□□□ -0.83
PDLIM5-203ENST00000359265 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 K7EQD1 137 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 VCYO14598 125 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 LEPROTL1O95214 131 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 DEFB130BP0DP73 79 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 DEFB130AP0DP74 79 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 LAGE3Q14657 143 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 Q6ZSN1 163 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 HSPB8Q9UJY1 196 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 TNFRSF18Q9Y5U5 241 aa9.84□□□□□ -0.83
PDLIM5-203ENST00000359265 TRGV4A0A0C4DH28 118 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 TRBV10-1A0A0K0K1A3 114 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 TCAPO15273 167 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 SMIM6P0DI80 62 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 P0DMU3 169 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 FAM231AP0DMU4 169 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 FAM231CP0DMU5 169 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 FCER1GP30273 86 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 RETNQ9HD89 108 aa9.83□□□□□ -0.84
PDLIM5-203ENST00000359265 A0A096LNJ9 63 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 TRBV27A0A0K0K1C4 114 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 DEFB4AO15263 64 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 DAD1P61803 113 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 SBSPONQ8IVN8 264 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 HERC2O95714 4834 aa9.82□□□□□ -0.84
PDLIM5-203ENST00000359265 TRBV6-4A0A1B0GX49 114 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 I3L3M4 83 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 NUDT3O95989 172 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 G0S2P27469 103 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 KRTDAPP60985 99 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 RPL36AP83881 106 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 RHOHQ15669 191 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 NEGR1Q7Z3B1 354 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 RPL36ALQ969Q0 106 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 TM2D3Q9BRN9 247 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
PDLIM5-203ENST00000359265 BTF3P20290 206 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-203ENST00000359265 FHL2Q14192 279 aa9.8□□□□□ -0.84
PDLIM5-203ENST00000359265 JOSD1Q15040 202 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-203ENST00000359265 B9D2Q9BPU9 175 aa9.8□□□□□ -0.84
PDLIM5-203ENST00000359265 PRADC1Q9BSG0 188 aa9.8□□□□□ -0.84
PDLIM5-203ENST00000359265 C11orf68Q9H3H3 251 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-203ENST00000359265 LINC01549A6NIU2 74 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms