RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SPATA12Q7Z6I5 190 aa7.81□□□□□ -1.16
TRAPPC4-201ENST00000359005 C1orf158Q8N1D5 194 aa7.81□□□□□ -1.16
TRAPPC4-201ENST00000359005 VAMP8Q9BV40 100 aa7.81□□□□□ -1.16
TRAPPC4-201ENST00000359005 RYR3Q15413 4870 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 TRAV26-2A0A0B4J265 109 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 SYS1-DBNDD2H3BUS1 97 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 CRYGDP07320 174 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 AZU1P20160 251 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 C11orf72Q8NBR9 251 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 OR4C5Q8NGB2 326 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 TNFRSF18Q9Y5U5 241 aa7.8□□□□□ -1.16
TRAPPC4-201ENST00000359005 RS1O15537 224 aa7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 LINC00315P59091 139 aa7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 SMAGPQ0VAQ4 97 aa7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 ZNF705AQ6ZN79 300 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 RNASE8Q8TDE3 154 aaKnown RBP7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 IFI27L1Q96BM0 104 aa7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 STAB2Q8WWQ8 2551 aa7.79□□□□□ -1.16
TRAPPC4-201ENST00000359005 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 TRAV4A0A0B4J268 109 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 SDHAF1A6NFY7 115 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 I3L3M4 83 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 M0QY20 66 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 GATA1P15976 413 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 RHOHQ15669 191 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 CFAP126Q5VTH2 177 aa7.78□□□□□ -1.16
TRAPPC4-201ENST00000359005 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 IGHV3-53P01767 116 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 DEFB121Q5J5C9 76 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 Q6ZN92 141 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 CSNK1G2-AS1Q8NCQ2 148 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 IL17DQ8TAD2 202 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 RPL39LQ96EH5 51 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 OVOL2Q9BRP0 275 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 DYNC2H1Q8NCM8 4307 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-201ENST00000359005 SACSQ9NZJ4 4579 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 AGRNO00468 2067 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRGV2A0A075B6R0 118 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 PCP4L1A6NKN8 68 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 SPRY2O43597 315 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 PRSS1P07477 247 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 LGALS9CQ6DKI2 356 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 WFDC10AQ9H1F0 79 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 JPT2Q9H910 190 aa7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 MRPL16Q9NX20 251 aaKnown RBP7.76□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRAV9-2A0A087WT02 112 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 TEX48A0A1B0GUV7 120 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 LYRM9A8MSI8 78 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 GIG44P09565 113 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 LINC01545Q5VT33 79 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 TOMM6Q96B49 74 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 NOP10Q9NPE3 64 aaKnown RBP7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 DNAH7Q8WXX0 4024 aa7.75□□□□□ -1.17
TRAPPC4-201ENST00000359005 GAS8-AS1O95177 125 aa7.74□□□□□ -1.17
TRAPPC4-201ENST00000359005 NPSP0C0P6 89 aa7.74□□□□□ -1.17
TRAPPC4-201ENST00000359005 MIFP14174 115 aa7.74□□□□□ -1.17
TRAPPC4-201ENST00000359005 RPL36AP83881 106 aaKnown RBP7.74□□□□□ -1.17
TRAPPC4-201ENST00000359005 ERASQ7Z444 233 aa7.74□□□□□ -1.17
TRAPPC4-201ENST00000359005 RPL36ALQ969Q0 106 aaKnown RBP7.74□□□□□ -1.17
TRAPPC4-201ENST00000359005 MUC4Q99102 2169 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 A0A096LNJ9 63 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRAV12-1A0A0B4J245 112 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 A8MZ25 164 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 H0Y8G0 127 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 TMEM97Q5BJF2 176 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 UFSP1Q6NVU6 142 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 C2orf66Q6UXQ4 117 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 C18orf15Q96N68 181 aa7.73□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRBV6-4A0A1B0GX49 114 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 K7EQD1 137 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 PLNP26678 52 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 COTL1Q14019 142 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 SPATA45Q537H7 98 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 ZNF664Q8N3J9 261 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 PAM16Q9Y3D7 125 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 SORL1Q92673 2214 aa7.72□□□□□ -1.17
TRAPPC4-201ENST00000359005 TRBV7-3A0A075B6L6 115 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 IGHV3-73A0A0B4J1V6 119 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 GAGE7O76087 117 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 GAGE12FP0CL80 117 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 GAGE12GP0CL81 117 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 GAGE12IP0CL82 117 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 Q6ZTI0 123 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 Q8N976 141 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms