RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 NDUFC2-KCTD14E9PQ53 114 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 DAZAP2Q15038 168 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-201ENST00000358694 DCANP1Q8TF63 244 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 V9GYY9 64 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 LRRC37AA6NMS7 1700 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
CTNND1-201ENST00000358694 A0A0J9YX75 114 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 SLPIP03973 132 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 SYCNQ0VAF6 134 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 MIAQ16674 131 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 PDCD11Q14690 1871 aaKnown RBP6.75□□□□□ -1.33
CTNND1-201ENST00000358694 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 SMIM9A6NGZ8 99 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 P0DMU3 169 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 LINC00643Q86TS7 51 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 NOTCH3Q9UM47 2321 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 SCN10AQ9Y5Y9 1956 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 CCKP06307 115 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 ZNF407Q9C0G0 2248 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 PARP14Q460N5 1801 aa6.75□□□□□ -1.33
CTNND1-201ENST00000358694 SPATA12Q7Z6I5 190 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 TCL1BO95988 128 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 GBF1Q92538 1859 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 PSME4Q14997 1843 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 ACACAQ13085 2346 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 LOC285556D6RIA3 1793 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 LINC00482Q8N8I6 264 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 C11orf53Q8IXP5 236 aa6.74□□□□□ -1.33
CTNND1-201ENST00000358694 PRR4Q16378 134 aa6.73□□□□□ -1.33
CTNND1-201ENST00000358694 C1orf147Q96MC9 270 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-201ENST00000358694 NRXN2Q9P2S2 1712 aa6.73□□□□□ -1.33
CTNND1-201ENST00000358694 CNOT1A5YKK6 2376 aaKnown RBP6.73□□□□□ -1.33
CTNND1-201ENST00000358694 LINC01548A6NM66 108 aa6.73□□□□□ -1.33
CTNND1-201ENST00000358694 G3V4G9 280 aa6.73□□□□□ -1.33
CTNND1-201ENST00000358694 PLCE1Q9P212 2302 aa6.73□□□□□ -1.33
CTNND1-201ENST00000358694 PATE2Q6UY27 113 aa6.73□□□□□ -1.33
CTNND1-201ENST00000358694 PIK3CD-AS1Q5SR53 167 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 TP53TG3Q9ULZ0 132 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 SCN5AQ14524 2016 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 DYSFO75923 2080 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 PLAC8L1A1L4L8 177 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 A6NDX4 124 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 FSHBP01225 129 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 IGF1P05019 195 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 PTH2Q96A98 100 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 ZFAND3Q9H8U3 227 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 NUPR2A6NF83 97 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 MIFP14174 115 aa6.72□□□□□ -1.33
CTNND1-201ENST00000358694 DOCK3Q8IZD9 2030 aa6.71□□□□□ -1.33
CTNND1-201ENST00000358694 ATRXP46100 2492 aa6.71□□□□□ -1.34
CTNND1-201ENST00000358694 MED12Q93074 2177 aa6.71□□□□□ -1.34
CTNND1-201ENST00000358694 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
CTNND1-201ENST00000358694 Q8N7P7 452 aa6.71□□□□□ -1.34
CTNND1-201ENST00000358694 SPANXB1Q9NS25 103 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-201ENST00000358694 LOXL1Q08397 574 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-201ENST00000358694 H7C423 109 aa6.7□□□□□ -1.34
CTNND1-201ENST00000358694 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
CTNND1-201ENST00000358694 RSPO1Q2MKA7 263 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-201ENST00000358694 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
CTNND1-201ENST00000358694 DHRS4-AS1Q9P1J3 65 aa6.7□□□□□ -1.34
CTNND1-201ENST00000358694 WNK2Q9Y3S1 2297 aa6.7□□□□□ -1.34
CTNND1-201ENST00000358694 LINC00467Q9BRT7 94 aa6.7□□□□□ -1.34
CTNND1-201ENST00000358694 SPTAN1Q13813 2472 aaKnown RBP6.7□□□□□ -1.34
CTNND1-201ENST00000358694 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
CTNND1-201ENST00000358694 LOC107984640A0A0U1RRK4 108 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 TNRC6BQ9UPQ9 1833 aaKnown RBP6.69□□□□□ -1.34
CTNND1-201ENST00000358694 CTRLP40313 264 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 DOCK11Q5JSL3 2073 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 LRRC75A-AS1Q8N1F1 130 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 C6orf99Q4VX62 202 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 PKDREJQ9NTG1 2253 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 TP53BP1Q12888 1972 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-201ENST00000358694 BRCA1P38398 1863 aaKnown RBP6.69□□□□□ -1.34
CTNND1-201ENST00000358694 PLXNA1Q9UIW2 1896 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 SBF2Q86WG5 1849 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 LINC00474Q9P2X8 69 aa6.69□□□□□ -1.34
CTNND1-201ENST00000358694 PHF3Q92576 2039 aaKnown RBP6.69□□□□□ -1.34
CTNND1-201ENST00000358694 RBBP6Q7Z6E9 1792 aaKnown RBP6.69□□□□□ -1.34
CTNND1-201ENST00000358694 FAM19A3Q7Z5A8 133 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 CIRBP-AS1Q8TBR5 109 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 SNURFQ9Y675 71 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 ROS1P08922 2347 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 HEATR5AQ86XA9 2040 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 DEFB114Q30KQ6 69 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 TMEM223A0PJW6 202 aa6.68□□□□□ -1.34
CTNND1-201ENST00000358694 TNFRSF13BO14836 293 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms