RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FAM231AP0DMU4 169 aa13.11□□□□□ -0.31
RTN4-204ENST00000357732 FAM231CP0DMU5 169 aa13.11□□□□□ -0.31
RTN4-204ENST00000357732 EDN2P20800 178 aa13.11□□□□□ -0.31
RTN4-204ENST00000357732 GATA3P23771 443 aa13.11□□□□□ -0.31
RTN4-204ENST00000357732 IGHV4-30-2A0A087WSY4 118 aa13.1□□□□□ -0.31
RTN4-204ENST00000357732 ZNF22P17026 224 aaPredicted RBP13.1□□□□□ -0.31
RTN4-204ENST00000357732 TMEM262E9PQX1 116 aa13.1□□□□□ -0.31
RTN4-204ENST00000357732 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
RTN4-204ENST00000357732 SCGB1C2P0DMR2 95 aa13.1□□□□□ -0.31
RTN4-204ENST00000357732 TMEM263Q8WUH6 116 aaKnown RBP13.09□□□□□ -0.31
RTN4-204ENST00000357732 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
RTN4-204ENST00000357732 IGLV4-3A0A075B6K6 122 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 A4D1N5 150 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 IGHV3-33P01772 117 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 COL12A1Q99715 3063 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 SPTAN1Q13813 2472 aaKnown RBP13.08□□□□□ -0.32
RTN4-204ENST00000357732 CKS1BP61024 79 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 ERG28Q9UKR5 140 aa13.08□□□□□ -0.32
RTN4-204ENST00000357732 ATP5J2P56134 94 aa13.07□□□□□ -0.32
RTN4-204ENST00000357732 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
RTN4-204ENST00000357732 Q6ZUT4 128 aa13.07□□□□□ -0.32
RTN4-204ENST00000357732 B4DSR2 109 aa13.07□□□□□ -0.32
RTN4-204ENST00000357732 M0R2P5 195 aa13.07□□□□□ -0.32
RTN4-204ENST00000357732 SPINK8P0C7L1 97 aa13.07□□□□□ -0.32
RTN4-204ENST00000357732 TMEM95Q3KNT9 176 aa13.06□□□□□ -0.32
RTN4-204ENST00000357732 WFDC12Q8WWY7 111 aa13.06□□□□□ -0.32
RTN4-204ENST00000357732 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
RTN4-204ENST00000357732 AVPP01185 164 aa13.06□□□□□ -0.32
RTN4-204ENST00000357732 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
RTN4-204ENST00000357732 PTH2Q96A98 100 aa13.05□□□□□ -0.32
RTN4-204ENST00000357732 SLC25A20O43772 301 aa13.05□□□□□ -0.32
RTN4-204ENST00000357732 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
RTN4-204ENST00000357732 ANKRD29Q8N6D5 301 aa13.05□□□□□ -0.32
RTN4-204ENST00000357732 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 FHL3Q13643 280 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 MUSTN1Q8IVN3 82 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 DEFB104AQ8WTQ1 72 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 OPRPNQ99935 248 aaPredicted RBP13.03□□□□□ -0.32
RTN4-204ENST00000357732 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
RTN4-204ENST00000357732 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 A0A0J9YXY3 114 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 DSCR9P59020 149 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 ATXN8Q156A1 80 aa13.03□□□□□ -0.32
RTN4-204ENST00000357732 CELSR2Q9HCU4 2923 aa13.02□□□□□ -0.32
RTN4-204ENST00000357732 TRBV30A0A0K0K1B3 111 aa13.02□□□□□ -0.32
RTN4-204ENST00000357732 RNF183Q96D59 192 aa13.02□□□□□ -0.32
RTN4-204ENST00000357732 TIMM21Q9BVV7 248 aa13.02□□□□□ -0.32
RTN4-204ENST00000357732 IGKV3-20P01619 116 aa13.02□□□□□ -0.33
RTN4-204ENST00000357732 XGP55808 180 aa13.02□□□□□ -0.33
RTN4-204ENST00000357732 A8MTW9 85 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 IGHV3-30-3P0DP02 117 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 SPANXDQ9BXN6 97 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 SPANXCQ9NY87 97 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 ELANEP08246 267 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 CD28P10747 220 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 C10orf99Q6UWK7 81 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 RAX2Q96IS3 184 aa13.01□□□□□ -0.33
RTN4-204ENST00000357732 C9JAW5 83 aa13□□□□□ -0.33
RTN4-204ENST00000357732 EIF4EBP3O60516 100 aaPredicted RBP13□□□□□ -0.33
RTN4-204ENST00000357732 MT-ATP8P03928 68 aa13□□□□□ -0.33
RTN4-204ENST00000357732 Q5PR19 223 aa13□□□□□ -0.33
RTN4-204ENST00000357732 SPANXA1Q9NS26 97 aa13□□□□□ -0.33
RTN4-204ENST00000357732 IGHV1-58A0A0C4DH39 117 aa13□□□□□ -0.33
RTN4-204ENST00000357732 TINCRA0A1B0GVN0 87 aa12.99□□□□□ -0.33
RTN4-204ENST00000357732 GEMIN7Q9H840 131 aaKnown RBP12.99□□□□□ -0.33
RTN4-204ENST00000357732 LITAFQ99732 161 aa12.99□□□□□ -0.33
RTN4-204ENST00000357732 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
RTN4-204ENST00000357732 NRGNQ92686 78 aa12.98□□□□□ -0.33
RTN4-204ENST00000357732 UBE2E2Q96LR5 201 aa12.98□□□□□ -0.33
RTN4-204ENST00000357732 TNFRSF18Q9Y5U5 241 aa12.98□□□□□ -0.33
RTN4-204ENST00000357732 J3QLI3 93 aa12.98□□□□□ -0.33
RTN4-204ENST00000357732 IGHV4-59P01825 116 aa12.98□□□□□ -0.33
RTN4-204ENST00000357732 RPL13AP40429 203 aaKnown RBP12.98□□□□□ -0.33
RTN4-204ENST00000357732 Q1RN00 199 aa12.97□□□□□ -0.33
RTN4-204ENST00000357732 LINC01620Q4KN68 170 aa12.97□□□□□ -0.33
RTN4-204ENST00000357732 DEFB112Q30KQ8 113 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 FAM104AQ969W3 186 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 SPXQ9BT56 116 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 CFAP46Q8IYW2 2715 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 TIMM17BO60830 172 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 DNAJC30Q96LL9 226 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 YAE1D1Q9NRH1 226 aa12.96□□□□□ -0.33
RTN4-204ENST00000357732 TRBV10-2A0A0K0K1G8 114 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 LINC00467Q9BRT7 94 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 SPG11Q96JI7 2443 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 TGFAP01135 160 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
RTN4-204ENST00000357732 MIAQ16674 131 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 VSIG2Q96IQ7 327 aa12.95□□□□□ -0.34
RTN4-204ENST00000357732 ZNF415Q09FC8 603 aa12.94□□□□□ -0.34
RTN4-204ENST00000357732 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
RTN4-204ENST00000357732 NDUFA12Q9UI09 145 aa12.94□□□□□ -0.34
RTN4-204ENST00000357732 PKD1L2Q7Z442 2459 aa12.94□□□□□ -0.34
RTN4-204ENST00000357732 COX6CP09669 75 aa12.94□□□□□ -0.34
RTN4-204ENST00000357732 IFITM1P13164 125 aa12.94□□□□□ -0.34
RTN4-204ENST00000357732 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms