RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HHLA3Q9XRX5 114 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 LCTP09848 1927 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 H7C423 109 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 MED12Q93074 2177 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 YLPM1P49750 1951 aaKnown RBP9.84□□□□□ -0.83
SMC4-202ENST00000357388 BLCAPP62952 87 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 IGFL2Q6UWQ7 119 aa9.84□□□□□ -0.83
SMC4-202ENST00000357388 SMIM26A0A096LP01 95 aa9.83□□□□□ -0.84
SMC4-202ENST00000357388 Q6Q795 121 aa9.83□□□□□ -0.84
SMC4-202ENST00000357388 SPRY2O43597 315 aa9.83□□□□□ -0.84
SMC4-202ENST00000357388 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.82□□□□□ -0.847e-7■■■■■ 37.4
SMC4-202ENST00000357388 NEXN-AS1Q8NBZ9 246 aa9.82□□□□□ -0.84
SMC4-202ENST00000357388 PTPRDP23468 1912 aa9.82□□□□□ -0.84
SMC4-202ENST00000357388 NBASA2RRP1 2371 aa9.82□□□□□ -0.84
SMC4-202ENST00000357388 TIMM17BO60830 172 aa9.82□□□□□ -0.84
SMC4-202ENST00000357388 GRNP28799 593 aaKnown RBP9.82□□□□□ -0.84
SMC4-202ENST00000357388 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 C11orf1Q9H5F2 150 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 TNRC6AQ8NDV7 1962 aaKnown RBP9.81□□□□□ -0.84
SMC4-202ENST00000357388 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 A6NED7 52 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 GPHB5Q86YW7 130 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 C4orf3Q8WVX3 66 aa9.81□□□□□ -0.84
SMC4-202ENST00000357388 PIK3CD-AS1Q5SR53 167 aa9.8□□□□□ -0.84
SMC4-202ENST00000357388 TMEM223A0PJW6 202 aa9.8□□□□□ -0.84
SMC4-202ENST00000357388 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
SMC4-202ENST00000357388 A0A087WW49 117 aa9.8□□□□□ -0.84
SMC4-202ENST00000357388 IBA57-AS1B1ANH7 110 aa9.8□□□□□ -0.84
SMC4-202ENST00000357388 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
SMC4-202ENST00000357388 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
SMC4-202ENST00000357388 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
SMC4-202ENST00000357388 DEFB135Q30KP9 77 aa9.79□□□□□ -0.84
SMC4-202ENST00000357388 TMEM263Q8WUH6 116 aaKnown RBP9.79□□□□□ -0.84
SMC4-202ENST00000357388 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
SMC4-202ENST00000357388 GPR179Q6PRD1 2367 aa9.79□□□□□ -0.84
SMC4-202ENST00000357388 TRIAP1O43715 76 aa9.78□□□□□ -0.84
SMC4-202ENST00000357388 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
SMC4-202ENST00000357388 SBF1O95248 1867 aa9.78□□□□□ -0.84
SMC4-202ENST00000357388 KMT2EQ8IZD2 1858 aa9.78□□□□□ -0.84
SMC4-202ENST00000357388 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
SMC4-202ENST00000357388 RNF138Q8WVD3 245 aa9.78□□□□□ -0.84
SMC4-202ENST00000357388 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.84
SMC4-202ENST00000357388 PRO0255Q9UI72 69 aa9.77□□□□□ -0.84
SMC4-202ENST00000357388 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
SMC4-202ENST00000357388 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
SMC4-202ENST00000357388 Q8N9W7 124 aa9.77□□□□□ -0.85
SMC4-202ENST00000357388 ESM1Q9NQ30 184 aa9.77□□□□□ -0.85
SMC4-202ENST00000357388 Q6JHZ5 121 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 FRMD6-AS1P0C7T7 363 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 LOXL1Q08397 574 aaPredicted RBP9.76□□□□□ -0.85
SMC4-202ENST00000357388 MLST8Q9BVC4 326 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 KLK12Q9UKR0 248 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 IGLV2-8P01709 118 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 ATRXP46100 2492 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 ZNF524Q96C55 264 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 HEATR5AQ86XA9 2040 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 A0A0J9YX75 114 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 ADORA2A-AS1P86434 159 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 C11orf45Q8TAV5 145 aa9.76□□□□□ -0.85
SMC4-202ENST00000357388 ZNF22P17026 224 aaPredicted RBP9.75□□□□□ -0.85
SMC4-202ENST00000357388 PHF3Q92576 2039 aaKnown RBP9.75□□□□□ -0.85
SMC4-202ENST00000357388 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
SMC4-202ENST00000357388 U3KQK5 164 aa9.75□□□□□ -0.85
SMC4-202ENST00000357388 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
SMC4-202ENST00000357388 PLXNA3P51805 1871 aa9.74□□□□□ -0.85
SMC4-202ENST00000357388 PCNX1Q96RV3 2341 aa9.74□□□□□ -0.85
SMC4-202ENST00000357388 SIPA1L1O43166 1804 aa9.74□□□□□ -0.85
SMC4-202ENST00000357388 WT1P19544 449 aaPredicted RBP9.73□□□□□ -0.85
SMC4-202ENST00000357388 SMIM9A6NGZ8 99 aa9.73□□□□□ -0.85
SMC4-202ENST00000357388 MBD6Q96DN6 1003 aa9.73□□□□□ -0.85
SMC4-202ENST00000357388 DOCK8Q8NF50 2099 aa9.73□□□□□ -0.85
SMC4-202ENST00000357388 LST1O00453 97 aa9.73□□□□□ -0.85
SMC4-202ENST00000357388 RITA1Q96K30 269 aa9.73□□□□□ -0.85
SMC4-202ENST00000357388 SIP14410 1827 aa9.73□□□□□ -0.85
SMC4-202ENST00000357388 HILS1P60008 231 aa9.72□□□□□ -0.85
SMC4-202ENST00000357388 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
SMC4-202ENST00000357388 Q8N9L7 120 aa9.72□□□□□ -0.85
SMC4-202ENST00000357388 ZNF407Q9C0G0 2248 aa9.72□□□□□ -0.85
SMC4-202ENST00000357388 GDF5OSQ5U4N7 250 aa9.72□□□□□ -0.85
SMC4-202ENST00000357388 IGLV2-14P01704 120 aa9.72□□□□□ -0.85
SMC4-202ENST00000357388 SCXQ7RTU7 201 aa9.71□□□□□ -0.85
SMC4-202ENST00000357388 MALRD1Q5VYJ5 2156 aa9.71□□□□□ -0.85
SMC4-202ENST00000357388 P0C879 139 aa9.71□□□□□ -0.85
SMC4-202ENST00000357388 M0QXV9 152 aa9.71□□□□□ -0.86
SMC4-202ENST00000357388 PLXNA4Q9HCM2 1894 aa9.71□□□□□ -0.86
SMC4-202ENST00000357388 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.86
SMC4-202ENST00000357388 FBXL19-AS1Q494R0 122 aa9.71□□□□□ -0.86
SMC4-202ENST00000357388 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 SNURFQ9Y675 71 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 THSD7BQ9C0I4 1608 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 IGLV1-47P01700 117 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 CCKP06307 115 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 LINC00694P0DN24 101 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 ODF3L1Q8IXM7 274 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
SMC4-202ENST00000357388 ZFP36P26651 326 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms