RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ICOSQ9Y6W8 199 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 A0A0J9YXV3 536 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 SLURP1P55000 103 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 TRIOO75962 3097 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 CRIP3Q6Q6R5 217 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
COL9A1-202ENST00000357250 FANCD2OSQ96PS1 177 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 CCL25O15444 150 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 CHD3Q12873 2000 aaKnown RBP9.03□□□□□ -0.96
COL9A1-202ENST00000357250 COX7A2LO14548 114 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 TRACP01848 142 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 Q8N1Y9 231 aa9.03□□□□□ -0.96
COL9A1-202ENST00000357250 Q71RC1 249 aaPredicted RBP9.02□□□□□ -0.97
COL9A1-202ENST00000357250 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 TANC2Q9HCD6 1990 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 A0A1B0GXF2 115 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 A4D1N5 150 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 GYPEP15421 78 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 DEFB136Q30KP8 78 aa9.02□□□□□ -0.97
COL9A1-202ENST00000357250 IGHV4OR15-8A0A075B7B6 117 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 A0A087WW49 117 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 A6NDX4 124 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 LINC00173Q6ZV60 143 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 PIFOQ8TCI5 191 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 COX7B2Q8TF08 81 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 C4orf3Q8WVX3 66 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 MRPL36Q9P0J6 103 aaKnown RBP9.01□□□□□ -0.97
COL9A1-202ENST00000357250 IGKV1D-37A0A075B6S9 117 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 ODF3BA8MYP8 253 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 ZFP36P26651 326 aaKnown RBP9.01□□□□□ -0.97
COL9A1-202ENST00000357250 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 INSL3P51460 131 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 MTORP42345 2549 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 A0A0J9YX75 114 aa9.01□□□□□ -0.97
COL9A1-202ENST00000357250 TNFRSF13BO14836 293 aaPredicted RBP9.01□□□□□ -0.97
COL9A1-202ENST00000357250 ODF1Q14990 250 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 C5orf38Q86SI9 138 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 OPRPNQ99935 248 aaPredicted RBP9□□□□□ -0.97
COL9A1-202ENST00000357250 E7EUB6 86 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 H3BT86 120 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 LINC01620Q4KN68 170 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.97
COL9A1-202ENST00000357250 CRYBA4P53673 196 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 VSIG2Q96IQ7 327 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 NUP210LQ5VU65 1888 aa9□□□□□ -0.97
COL9A1-202ENST00000357250 A0A096LPF7 62 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 DSCAMO60469 2012 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 A0A0J9YY99 117 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 JMJD7-PLA2G4BH0Y9G9 81 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 ZNF462Q96JM2 2506 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 PROP1O75360 226 aa8.99□□□□□ -0.97
COL9A1-202ENST00000357250 LOXL1Q08397 574 aaPredicted RBP8.98□□□□□ -0.97
COL9A1-202ENST00000357250 HIST2H2BCQ6DN03 193 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 CLPSL2Q6UWE3 100 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 IGF1P05019 195 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 CCL18P55774 89 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
COL9A1-202ENST00000357250 MLST8Q9BVC4 326 aa8.98□□□□□ -0.97
COL9A1-202ENST00000357250 FN1P02751 2386 aaKnown RBP8.98□□□□□ -0.97
COL9A1-202ENST00000357250 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 FXYD2P54710 66 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 A0A0B4J2C4 111 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 EIF4EBP1Q13541 118 aaPredicted RBP8.97□□□□□ -0.97
COL9A1-202ENST00000357250 TDRG1Q3Y452 100 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 Q6ZQT7 251 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 NDUFA1O15239 70 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 LRRC75A-AS1Q8N1F1 130 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 KIAA1549Q9HCM3 1950 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 UBE2BP63146 152 aa8.97□□□□□ -0.97
COL9A1-202ENST00000357250 TAX1BP3O14907 124 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 IGLV2-8P01709 118 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 EBI3Q14213 229 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 PRRC2AP48634 2157 aaKnown RBP8.96□□□□□ -0.97
COL9A1-202ENST00000357250 LRP4O75096 1905 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 IGLC6P0CF74 106 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 BRWD1-AS2P59051 145 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 LMO4P61968 165 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 HHLA3Q9XRX5 114 aa8.96□□□□□ -0.97
COL9A1-202ENST00000357250 CLPSL1A2RUU4 121 aa8.96□□□□□ -0.98
COL9A1-202ENST00000357250 LGALS9O00182 355 aa8.96□□□□□ -0.98
COL9A1-202ENST00000357250 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
COL9A1-202ENST00000357250 RPL39P62891 51 aaKnown RBP8.96□□□□□ -0.98
COL9A1-202ENST00000357250 MDFICQ9P1T7 246 aa8.96□□□□□ -0.98
COL9A1-202ENST00000357250 PDE6GP18545 87 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms