RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LINC00526Q96FQ7 95 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 EPG5Q9HCE0 2579 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.41
CDC42SE1-201ENST00000357235 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.42
CDC42SE1-201ENST00000357235 IGHV4-39P01824 125 aa6.21□□□□□ -1.42
CDC42SE1-201ENST00000357235 GAGE2AQ6NT46 116 aa6.21□□□□□ -1.42
CDC42SE1-201ENST00000357235 BPESC1Q9GZL8 116 aa6.21□□□□□ -1.42
CDC42SE1-201ENST00000357235 VPS13CQ709C8 3753 aa6.21□□□□□ -1.42
CDC42SE1-201ENST00000357235 TRAV41A0A0B4J266 112 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 HERVK_113P61574 105 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 EBI3Q14213 229 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 Q1RN00 199 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 A0A0J9YY99 117 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 TRBV10-2A0A0K0K1G8 114 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 UBE2E1P51965 193 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 C2orf82Q6UX34 121 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 SPANXDQ9BXN6 97 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 SIRPDQ9H106 197 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 HIVEP3Q5T1R4 2406 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 IGHV3-30P01768 117 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 IGHV3-30-5P0DP03 117 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 DUX5Q96PT3 197 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
CDC42SE1-201ENST00000357235 A0A1W2PPR1 153 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 P0DMU3 169 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 COX6B1P14854 86 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 Q6ZS46 218 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 POM121L12Q8N7R1 296 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 LINC00477Q96M19 166 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 DUX3Q96PT4 197 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 NOTCH3Q9UM47 2321 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 TRAV12-3A0A0B4J271 114 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 IGHV3-33P01772 117 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 HTN1P15515 57 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 ADORA2A-AS1P86434 159 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 MRAPQ8TCY5 172 aa6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE1-201ENST00000357235 C5orf56Q8N8D9 126 aa6.18□□□□□ -1.42
CDC42SE1-201ENST00000357235 ZNRF2Q8NHG8 242 aa6.18□□□□□ -1.42
CDC42SE1-201ENST00000357235 BEX4Q9NWD9 120 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE1-201ENST00000357235 IGHV4-4A0A075B6R2 117 aa6.18□□□□□ -1.42
CDC42SE1-201ENST00000357235 K7ENP7 123 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 EDN2P20800 178 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 C11orf71Q6IPW1 123 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 SLC25A29Q8N8R3 303 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 MRPL53Q96EL3 112 aaKnown RBP6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 SDHAF1A6NFY7 115 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 CRYGDP07320 174 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 GPHB5Q86YW7 130 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 KIR2DL5BQ8NHK3 375 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 RHPN1-AS1Q9BWJ2 59 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 OVOL1O14753 267 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 ATP5G1P05496 136 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 ELANEP08246 267 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 COX7CP15954 63 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 UCNP55089 124 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 TSPEAR-AS2P59090 65 aa6.17□□□□□ -1.42
CDC42SE1-201ENST00000357235 TSHBP01222 138 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 C4orf26Q17RF5 130 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 HRCT1Q6UXD1 115 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 ITLN2Q8WWU7 325 aaPredicted RBP6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 ADARB2-AS1A8MUL3 147 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 MOB4Q9Y3A3 225 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 U3KQE9 123 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 MUC4Q99102 2169 aa6.16□□□□□ -1.42
CDC42SE1-201ENST00000357235 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
CDC42SE1-201ENST00000357235 RNF223E7ERA6 249 aa6.15□□□□□ -1.42
CDC42SE1-201ENST00000357235 TRACP01848 142 aa6.15□□□□□ -1.42
CDC42SE1-201ENST00000357235 BLCAPP62952 87 aa6.15□□□□□ -1.42
CDC42SE1-201ENST00000357235 TMEM263Q8WUH6 116 aaKnown RBP6.15□□□□□ -1.42
CDC42SE1-201ENST00000357235 PIMREGQ9BSJ6 248 aa6.15□□□□□ -1.42
CDC42SE1-201ENST00000357235 H3BT86 120 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 CRYGAP11844 174 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 FBXL19-AS1Q494R0 122 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 PKD1L2Q7Z442 2459 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 CRYBG3Q68DQ2 2970 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 A0A0B4J2C4 111 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 H7C423 109 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 J3QQQ9 107 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 VCYO14598 125 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 PPP1R17O96001 155 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 PRSS2P07478 247 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms