RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 SEM1Q6ZVN7 128 aa5.68□□□□□ -1.5
CCR9-201ENST00000355983 M0QY20 66 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 RS1O15537 224 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 S100A7L2Q5SY68 101 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 LINC01561Q8N1V8 128 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 MAFAQ8NHW3 353 aaPredicted RBP5.67□□□□□ -1.5
CCR9-201ENST00000355983 C16orf92Q96LL3 132 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 M0R1W7 72 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 DNAL4O96015 105 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 RNF152Q8N8N0 203 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 MUC4Q99102 2169 aa5.67□□□□□ -1.5
CCR9-201ENST00000355983 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 FAM236DA0A1B0GTK5 79 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 SOCS3O14543 225 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 FAM236CP0DP71 79 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 NDPQ00604 133 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 ARHGAP32A7KAX9 2087 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 WDR87Q6ZQQ6 2873 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 LAMA1P25391 3075 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 IGHV3-64A0A075B6Q5 118 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 ODF3BA8MYP8 253 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 KLLNB2CW77 178 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 IGHG2P01859 326 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 Q6ZSV7 163 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 TMEM86BQ8N661 226 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 CCL17Q92583 94 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 FAM104AQ969W3 186 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 ZNF580Q9UK33 172 aa5.66□□□□□ -1.5
CCR9-201ENST00000355983 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.5
CCR9-201ENST00000355983 GNRH2O43555 120 aa5.65□□□□□ -1.5
CCR9-201ENST00000355983 IGHV3-23P01764 117 aa5.65□□□□□ -1.5
CCR9-201ENST00000355983 RPL28P46779 137 aaKnown RBP5.65□□□□□ -1.5
CCR9-201ENST00000355983 KLRB1Q12918 225 aa5.65□□□□□ -1.5
CCR9-201ENST00000355983 FHL2Q14192 279 aa5.65□□□□□ -1.5
CCR9-201ENST00000355983 C20orf173Q96LM9 149 aa5.65□□□□□ -1.5
CCR9-201ENST00000355983 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.5
CCR9-201ENST00000355983 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.51
CCR9-201ENST00000355983 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.51
CCR9-201ENST00000355983 CADP27708 2225 aa5.65□□□□□ -1.51
CCR9-201ENST00000355983 IGF1P05019 195 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 CD28P10747 220 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 COX7A1P24310 79 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 C15orf32Q32M92 178 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 CCDC140Q96MF4 163 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
CCR9-201ENST00000355983 IGHV7-81A0A0B4J1V7 117 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 ADARB2-AS1A8MUL3 147 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 F5H697 171 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 RPL11P62913 178 aaKnown RBP5.64□□□□□ -1.51
CCR9-201ENST00000355983 Q8N2B8 174 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 C10orf105Q8TEF2 133 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 RNASE6Q93091 150 aaKnown RBP5.64□□□□□ -1.51
CCR9-201ENST00000355983 C16orf95Q9H693 158 aa5.64□□□□□ -1.51
CCR9-201ENST00000355983 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
CCR9-201ENST00000355983 HIST2H2BCQ6DN03 193 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 HIST2H2BDQ6DRA6 164 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 TMEM105Q8N8V8 129 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 TMEM243Q9BU79 118 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 TRAV13-2A0A0B4J235 113 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 FAM223BA6NKX1 122 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 FAM19A3Q7Z5A8 133 aa5.63□□□□□ -1.51
CCR9-201ENST00000355983 RBMY1BA6NDE4 496 aaKnown RBP5.62□□□□□ -1.51
CCR9-201ENST00000355983 RBMY1EA6NEQ0 496 aaKnown RBP5.62□□□□□ -1.51
CCR9-201ENST00000355983 H0YGX0 51 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 RBMY1DP0C7P1 496 aaKnown RBP5.62□□□□□ -1.51
CCR9-201ENST00000355983 RBMY1A1P0DJD3 496 aaKnown RBP5.62□□□□□ -1.51
CCR9-201ENST00000355983 RBMY1CP0DJD4 496 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 RBMY1FQ15415 496 aaKnown RBP5.62□□□□□ -1.51
CCR9-201ENST00000355983 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 NBEAQ8NFP9 2946 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 NACAE9PAV3 2078 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 PLCE1Q9P212 2302 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 MINOS1Q5TGZ0 78 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 MINOS1-NBL1R4GNA1 71 aa5.62□□□□□ -1.51
CCR9-201ENST00000355983 A0A1W2PNU3 283 aaPredicted RBP5.61□□□□□ -1.51
CCR9-201ENST00000355983 EDN2P20800 178 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 XCL1P47992 114 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 XCL2Q9UBD3 114 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 V9GYY9 64 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 ZNF318Q5VUA4 2279 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 A0A087WWL8 130 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 TRAV12-3A0A0B4J271 114 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 IGHV3-16A0A0C4DH30 117 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 IGHV3-66A0A0C4DH42 116 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 KNCNA6PVL3 124 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 GHRHP01286 108 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 FAM215AQ9Y5M1 114 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 SPEGQ15772 3267 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 FRYQ5TBA9 3013 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 IGHV3OR16-8A0A075B7F1 116 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 H7BZZ5 65 aa5.61□□□□□ -1.51
CCR9-201ENST00000355983 Q8N9W7 124 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms