RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 AMELXQ99217 191 aa13.42□□□□□ -0.26
PDZD3-202ENST00000355547 CENPEQ02224 2701 aa13.42□□□□□ -0.26
PDZD3-202ENST00000355547 DOPEY2Q9Y3R5 2298 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 TMEM89A2RUT3 159 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 RHOHQ15669 191 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 NFE4Q86UQ8 179 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 NDUFA11Q86Y39 141 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 VCX2Q9H322 139 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 K7EQG2 157 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 Q8N1Y9 231 aa13.41□□□□□ -0.26
PDZD3-202ENST00000355547 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 MT-ATP8P03928 68 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 SNRPD3P62318 126 aaKnown RBP13.4□□□□□ -0.26
PDZD3-202ENST00000355547 TMEM170BQ5T4T1 132 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 FAM74A4Q5TZK3 123 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 CFAP161Q6P656 301 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 CELSR2Q9HCU4 2923 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 CELSR1Q9NYQ6 3014 aa13.4□□□□□ -0.26
PDZD3-202ENST00000355547 B4DSR2 109 aa13.39□□□□□ -0.27
PDZD3-202ENST00000355547 SMCPP49901 116 aaPredicted RBP13.39□□□□□ -0.27
PDZD3-202ENST00000355547 TRAV12-2A0A075B6T6 113 aa13.39□□□□□ -0.27
PDZD3-202ENST00000355547 IGHV1OR15-1A0A075B7D0 117 aa13.39□□□□□ -0.27
PDZD3-202ENST00000355547 TRPT1Q86TN4 253 aaKnown RBP13.39□□□□□ -0.27
PDZD3-202ENST00000355547 RNF152Q8N8N0 203 aa13.39□□□□□ -0.27
PDZD3-202ENST00000355547 ZNF256Q9Y2P7 627 aaPredicted RBP13.39□□□□□ -0.27
PDZD3-202ENST00000355547 J3QQQ9 107 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 RNF183Q96D59 192 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 NBPF19A0A087WUL8 3843 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 P0DMU3 169 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 FAM231AP0DMU4 169 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 FAM231CP0DMU5 169 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 XGP55808 180 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 ZNF56Q15929 161 aa13.38□□□□□ -0.27
PDZD3-202ENST00000355547 GATA3P23771 443 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 C10orf99Q6UWK7 81 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 IGKV3-20P01619 116 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 CFC1P0CG37 223 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 FHL3Q13643 280 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 LYRM7Q5U5X0 104 aa13.37□□□□□ -0.27
PDZD3-202ENST00000355547 LOC107984156A0A0G2JMH3 177 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 IGHV4-59P01825 116 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 ARL17AQ8IVW1 177 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 C20orf203Q8NBC4 194 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 PPDPFLQ8WWR9 84 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 CSMD2Q7Z408 3487 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 TMEM223A0PJW6 202 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 PSMB2P49721 201 aa13.36□□□□□ -0.27
PDZD3-202ENST00000355547 LEPROTO15243 131 aa13.35□□□□□ -0.27
PDZD3-202ENST00000355547 SPINK13Q1W4C9 94 aa13.35□□□□□ -0.27
PDZD3-202ENST00000355547 DEFB112Q30KQ8 113 aa13.35□□□□□ -0.27
PDZD3-202ENST00000355547 OPRPNQ99935 248 aaPredicted RBP13.35□□□□□ -0.27
PDZD3-202ENST00000355547 LGALS3P17931 250 aaKnown RBP13.34□□□□□ -0.27
PDZD3-202ENST00000355547 GAGE5Q13069 117 aa13.34□□□□□ -0.27
PDZD3-202ENST00000355547 GAGE6Q13070 117 aa13.34□□□□□ -0.27
PDZD3-202ENST00000355547 I3L3M4 83 aa13.34□□□□□ -0.27
PDZD3-202ENST00000355547 C10orf126Q8N4M7 172 aa13.34□□□□□ -0.27
PDZD3-202ENST00000355547 TRBV20-1A0A075B6N2 111 aa13.33□□□□□ -0.28
PDZD3-202ENST00000355547 ANAPC13Q9BS18 74 aa13.33□□□□□ -0.28
PDZD3-202ENST00000355547 VPS13CQ709C8 3753 aa13.33□□□□□ -0.28
PDZD3-202ENST00000355547 SFTA2Q6UW10 78 aa13.33□□□□□ -0.28
PDZD3-202ENST00000355547 TEN1Q86WV5 123 aa13.33□□□□□ -0.28
PDZD3-202ENST00000355547 EDA2RQ9HAV5 297 aa13.33□□□□□ -0.28
PDZD3-202ENST00000355547 PRO1854Q9UHT4 67 aa13.32□□□□□ -0.28
PDZD3-202ENST00000355547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDZD3-202ENST00000355547 TRGV11A0A075B6L2 103 aa13.32□□□□□ -0.28
PDZD3-202ENST00000355547 ZNF22P17026 224 aaPredicted RBP13.32□□□□□ -0.28
PDZD3-202ENST00000355547 SYNJ2BPP57105 145 aa13.32□□□□□ -0.28
PDZD3-202ENST00000355547 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
PDZD3-202ENST00000355547 FBN2P35556 2912 aa13.31□□□□□ -0.28
PDZD3-202ENST00000355547 RHODO00212 210 aa13.31□□□□□ -0.28
PDZD3-202ENST00000355547 TCL1BO95988 128 aa13.31□□□□□ -0.28
PDZD3-202ENST00000355547 DSCR9P59020 149 aa13.31□□□□□ -0.28
PDZD3-202ENST00000355547 CARD19Q96LW7 228 aa13.31□□□□□ -0.28
PDZD3-202ENST00000355547 IGLV4-3A0A075B6K6 122 aa13.3□□□□□ -0.28
PDZD3-202ENST00000355547 SS18L2Q9UHA2 77 aa13.3□□□□□ -0.28
PDZD3-202ENST00000355547 ZFAND6Q6FIF0 208 aa13.3□□□□□ -0.28
PDZD3-202ENST00000355547 SPG11Q96JI7 2443 aa13.3□□□□□ -0.28
PDZD3-202ENST00000355547 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
PDZD3-202ENST00000355547 PYGO1Q9Y3Y4 419 aa13.29□□□□□ -0.28
PDZD3-202ENST00000355547 A0A0J9YXV3 536 aa13.28□□□□□ -0.28
PDZD3-202ENST00000355547 ELANEP08246 267 aa13.28□□□□□ -0.28
PDZD3-202ENST00000355547 PTPN13Q12923 2485 aa13.28□□□□□ -0.28
PDZD3-202ENST00000355547 CSPG4Q6UVK1 2322 aa13.28□□□□□ -0.28
PDZD3-202ENST00000355547 A4D1N5 150 aa13.28□□□□□ -0.28
PDZD3-202ENST00000355547 LINC01356Q8N9X3 169 aa13.28□□□□□ -0.28
PDZD3-202ENST00000355547 EIF4EBP3O60516 100 aaPredicted RBP13.27□□□□□ -0.28
PDZD3-202ENST00000355547 RBMY1A1P0DJD3 496 aaKnown RBP13.27□□□□□ -0.28
PDZD3-202ENST00000355547 RBMY1CP0DJD4 496 aa13.27□□□□□ -0.28
PDZD3-202ENST00000355547 HOXD3P31249 432 aaPredicted RBP13.27□□□□□ -0.28
PDZD3-202ENST00000355547 RBMY1FQ15415 496 aaKnown RBP13.27□□□□□ -0.28
PDZD3-202ENST00000355547 HIST2H2BCQ6DN03 193 aa13.27□□□□□ -0.28
PDZD3-202ENST00000355547 FAM104AQ969W3 186 aa13.27□□□□□ -0.28
PDZD3-202ENST00000355547 CITED1Q99966 193 aa13.27□□□□□ -0.28
PDZD3-202ENST00000355547 TEX29Q8N6K0 151 aa13.27□□□□□ -0.29
PDZD3-202ENST00000355547 TMEM263Q8WUH6 116 aaKnown RBP13.27□□□□□ -0.29
PDZD3-202ENST00000355547 UBE2E2Q96LR5 201 aa13.27□□□□□ -0.29
PDZD3-202ENST00000355547 A8MTW9 85 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms