RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
PGBD2-202ENST00000355360 ZNRF2Q8NHG8 242 aa10.37□□□□□ -0.75
PGBD2-202ENST00000355360 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
PGBD2-202ENST00000355360 DEFB131AP59861 70 aa10.37□□□□□ -0.75
PGBD2-202ENST00000355360 RNASE13Q5GAN3 156 aaKnown RBP10.37□□□□□ -0.75
PGBD2-202ENST00000355360 ZNF479Q96JC4 524 aa10.37□□□□□ -0.75
PGBD2-202ENST00000355360 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
PGBD2-202ENST00000355360 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 K7ERU9 68 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 M0QY20 66 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
PGBD2-202ENST00000355360 ZNF580Q9UK33 172 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 ITPR2Q14571 2701 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 E9PLD3 99 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 WFDC2Q14508 124 aa10.36□□□□□ -0.75
PGBD2-202ENST00000355360 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 VCYO14598 125 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 COX6B1P14854 86 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 GATA3P23771 443 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
PGBD2-202ENST00000355360 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
PGBD2-202ENST00000355360 APOMO95445 188 aa10.34□□□□□ -0.75
PGBD2-202ENST00000355360 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
PGBD2-202ENST00000355360 RBMY1BA6NDE4 496 aaKnown RBP10.34□□□□□ -0.75
PGBD2-202ENST00000355360 RBMY1EA6NEQ0 496 aaKnown RBP10.34□□□□□ -0.75
PGBD2-202ENST00000355360 RBMY1DP0C7P1 496 aaKnown RBP10.34□□□□□ -0.75
PGBD2-202ENST00000355360 LGALS9O00182 355 aa10.33□□□□□ -0.76
PGBD2-202ENST00000355360 PMVKQ15126 192 aa10.33□□□□□ -0.76
PGBD2-202ENST00000355360 Q6YL49 198 aa10.33□□□□□ -0.76
PGBD2-202ENST00000355360 TMEM61Q8N0U2 210 aa10.33□□□□□ -0.76
PGBD2-202ENST00000355360 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 DSCR9P59020 149 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 Q5PR19 223 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 LINC01549A6NIU2 74 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 PPP1R17O96001 155 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 Q6ZSN1 163 aa10.32□□□□□ -0.76
PGBD2-202ENST00000355360 A0A1W2PRX2 142 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 FOXI2Q6ZQN5 318 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 Q96MF0 132 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 G3V4G9 280 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
PGBD2-202ENST00000355360 IGHV3-38A0A0C4DH36 116 aa10.3□□□□□ -0.76
PGBD2-202ENST00000355360 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
PGBD2-202ENST00000355360 DLX4Q92988 240 aaPredicted RBP10.3□□□□□ -0.76
PGBD2-202ENST00000355360 SPAG8Q99932 426 aaPredicted RBP10.3□□□□□ -0.76
PGBD2-202ENST00000355360 A0A0J9YXV3 536 aa10.3□□□□□ -0.76
PGBD2-202ENST00000355360 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
PGBD2-202ENST00000355360 MRPL16Q9NX20 251 aaKnown RBP10.3□□□□□ -0.76
PGBD2-202ENST00000355360 ELANEP08246 267 aa10.29□□□□□ -0.76
PGBD2-202ENST00000355360 IGHV3OR16-12A0A075B7B8 117 aa10.29□□□□□ -0.76
PGBD2-202ENST00000355360 INSL3P51460 131 aa10.29□□□□□ -0.76
PGBD2-202ENST00000355360 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
PGBD2-202ENST00000355360 LOC107984156A0A0G2JMH3 177 aa10.28□□□□□ -0.76
PGBD2-202ENST00000355360 A0A0J9YY99 117 aa10.28□□□□□ -0.76
PGBD2-202ENST00000355360 TAL2Q16559 108 aa10.28□□□□□ -0.76
PGBD2-202ENST00000355360 ARL17AQ8IVW1 177 aa10.28□□□□□ -0.76
PGBD2-202ENST00000355360 FSHBP01225 129 aa10.28□□□□□ -0.76
PGBD2-202ENST00000355360 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
PGBD2-202ENST00000355360 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 A8MZ25 164 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 H3BMM0 161 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 TIMM17AQ99595 171 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 J3QLI3 93 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 ODF3Q96PU9 254 aa10.27□□□□□ -0.77
PGBD2-202ENST00000355360 SPXQ9BT56 116 aa10.26□□□□□ -0.77
PGBD2-202ENST00000355360 J3QQQ9 107 aa10.26□□□□□ -0.77
PGBD2-202ENST00000355360 CD28P10747 220 aa10.26□□□□□ -0.77
PGBD2-202ENST00000355360 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
PGBD2-202ENST00000355360 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
PGBD2-202ENST00000355360 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 I3L3M4 83 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 TSPAN13O95857 204 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 HERVK_113P61574 105 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 RPL32P62910 135 aaKnown RBP10.25□□□□□ -0.77
PGBD2-202ENST00000355360 AMELXQ99217 191 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.25□□□□□ -0.77
PGBD2-202ENST00000355360 IGKV2-29A2NJV5 120 aaPredicted RBP10.25□□□□□ -0.77
PGBD2-202ENST00000355360 LINC01619G3V211 115 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 H7C2G1 150 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 DEFB113Q30KQ7 82 aa10.25□□□□□ -0.77
PGBD2-202ENST00000355360 TMEM89A2RUT3 159 aa10.24□□□□□ -0.77
PGBD2-202ENST00000355360 PSMB2P49721 201 aa10.24□□□□□ -0.77
PGBD2-202ENST00000355360 ZNF418Q8TF45 676 aaPredicted RBP10.24□□□□□ -0.77
PGBD2-202ENST00000355360 FAM104AQ969W3 186 aa10.24□□□□□ -0.77
PGBD2-202ENST00000355360 PTH2Q96A98 100 aa10.24□□□□□ -0.77
PGBD2-202ENST00000355360 LINC01587Q99440 93 aa10.24□□□□□ -0.77
PGBD2-202ENST00000355360 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
PGBD2-202ENST00000355360 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms