RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 PTH2Q96A98 100 aa15.97■□□□□ 0.15
LIMS2-202ENST00000355119 USP9YO00507 2555 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-202ENST00000355119 ZNF815PA8K554 130 aa15.97■□□□□ 0.15
LIMS2-202ENST00000355119 HTN1P15515 57 aa15.97■□□□□ 0.15
LIMS2-202ENST00000355119 SCGB2A2Q13296 93 aa15.97■□□□□ 0.15
LIMS2-202ENST00000355119 RAX2Q96IS3 184 aa15.97■□□□□ 0.15
LIMS2-202ENST00000355119 LINC00467Q9BRT7 94 aa15.97■□□□□ 0.15
LIMS2-202ENST00000355119 DNAJC9-AS1A6NH13 148 aa15.96■□□□□ 0.15
LIMS2-202ENST00000355119 M0R2P5 195 aa15.96■□□□□ 0.15
LIMS2-202ENST00000355119 CD300EQ496F6 205 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-202ENST00000355119 A8MWV9 139 aa15.95■□□□□ 0.14
LIMS2-202ENST00000355119 C20orf203Q8NBC4 194 aa15.95■□□□□ 0.14
LIMS2-202ENST00000355119 WFDC11Q8NEX6 87 aa15.95■□□□□ 0.14
LIMS2-202ENST00000355119 C12orf74Q32Q52 190 aa15.95■□□□□ 0.14
LIMS2-202ENST00000355119 MAP1AP78559 2803 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-202ENST00000355119 DOPEY2Q9Y3R5 2298 aa15.94■□□□□ 0.14
LIMS2-202ENST00000355119 P0DMU3 169 aa15.94■□□□□ 0.14
LIMS2-202ENST00000355119 FAM231AP0DMU4 169 aa15.94■□□□□ 0.14
LIMS2-202ENST00000355119 FAM231CP0DMU5 169 aa15.94■□□□□ 0.14
LIMS2-202ENST00000355119 RBX1P62877 108 aa15.94■□□□□ 0.14
LIMS2-202ENST00000355119 POLQO75417 2590 aa15.93■□□□□ 0.14
LIMS2-202ENST00000355119 TRAV25A0A0B4J276 109 aa15.93■□□□□ 0.14
LIMS2-202ENST00000355119 EMP1P54849 157 aa15.93■□□□□ 0.14
LIMS2-202ENST00000355119 OCIAD2Q56VL3 154 aa15.93■□□□□ 0.14
LIMS2-202ENST00000355119 CLUHP3Q96NS8 147 aa15.93■□□□□ 0.14
LIMS2-202ENST00000355119 NFE4Q86UQ8 179 aa15.92■□□□□ 0.14
LIMS2-202ENST00000355119 INSP01308 110 aa15.92■□□□□ 0.14
LIMS2-202ENST00000355119 SCGB1D4Q6XE38 83 aa15.92■□□□□ 0.14
LIMS2-202ENST00000355119 A0A1B0GWB2 263 aa15.91■□□□□ 0.14
LIMS2-202ENST00000355119 IGLL5B9A064 214 aa15.91■□□□□ 0.14
LIMS2-202ENST00000355119 TMEM170BQ5T4T1 132 aa15.91■□□□□ 0.14
LIMS2-202ENST00000355119 LINC01587Q99440 93 aa15.91■□□□□ 0.14
LIMS2-202ENST00000355119 ZNRF2Q8NHG8 242 aa15.9■□□□□ 0.14
LIMS2-202ENST00000355119 SPXQ9BT56 116 aa15.9■□□□□ 0.14
LIMS2-202ENST00000355119 IGHV3-73A0A0B4J1V6 119 aa15.9■□□□□ 0.14
LIMS2-202ENST00000355119 CSMD2Q7Z408 3487 aa15.9■□□□□ 0.14
LIMS2-202ENST00000355119 LRRK2Q5S007 2527 aa15.89■□□□□ 0.13
LIMS2-202ENST00000355119 PLEKHB2Q96CS7 222 aa15.89■□□□□ 0.13
LIMS2-202ENST00000355119 TNFRSF18Q9Y5U5 241 aa15.89■□□□□ 0.13
LIMS2-202ENST00000355119 FHL3Q13643 280 aa15.89■□□□□ 0.13
LIMS2-202ENST00000355119 RHODO00212 210 aa15.88■□□□□ 0.13
LIMS2-202ENST00000355119 HIST2H2BDQ6DRA6 164 aa15.88■□□□□ 0.13
LIMS2-202ENST00000355119 C11orf72Q8NBR9 251 aa15.88■□□□□ 0.13
LIMS2-202ENST00000355119 OPRPNQ99935 248 aaPredicted RBP15.88■□□□□ 0.13
LIMS2-202ENST00000355119 NAV2Q8IVL1 2488 aa15.88■□□□□ 0.13
LIMS2-202ENST00000355119 ZANQ9Y493 2812 aa15.88■□□□□ 0.13
LIMS2-202ENST00000355119 TMEM238LA0A1B0GVL6 79 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 A6NJY4 79 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 PROK1P58294 105 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 ZNF479Q96JC4 524 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 PYGO1Q9Y3Y4 419 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 PTPN13Q12923 2485 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 IGLV4-3A0A075B6K6 122 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 PRM2P04554 102 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 CFAP126Q5VTH2 177 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 VCX2Q9H322 139 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 ESM1Q9NQ30 184 aa15.87■□□□□ 0.13
LIMS2-202ENST00000355119 K7ERU9 68 aa15.86■□□□□ 0.13
LIMS2-202ENST00000355119 CCL24O00175 119 aa15.86■□□□□ 0.13
LIMS2-202ENST00000355119 SRSF9Q13242 221 aaKnown RBP eCLIP15.86■□□□□ 0.13
LIMS2-202ENST00000355119 KMT2BQ9UMN6 2715 aaPredicted RBP15.86■□□□□ 0.13
LIMS2-202ENST00000355119 BEAN1Q3B7T3 259 aa15.85■□□□□ 0.13
LIMS2-202ENST00000355119 ODF3L2Q3SX64 289 aa15.85■□□□□ 0.13
LIMS2-202ENST00000355119 A0A1W2PRX2 142 aa15.85■□□□□ 0.13
LIMS2-202ENST00000355119 CD28P10747 220 aa15.85■□□□□ 0.13
LIMS2-202ENST00000355119 RNF151Q2KHN1 245 aa15.85■□□□□ 0.13
LIMS2-202ENST00000355119 RRN3P1Q2M238 152 aa15.85■□□□□ 0.13
LIMS2-202ENST00000355119 A0A0J9YY99 117 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 STHQ8IWL8 128 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 DNAJC30Q96LL9 226 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 TMEM223A0PJW6 202 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 J3QQQ9 107 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 LEPROTO15243 131 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 LGALS3P17931 250 aaKnown RBP15.84■□□□□ 0.13
LIMS2-202ENST00000355119 CRYBA4P53673 196 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 TSPEAR-AS2P59090 65 aa15.84■□□□□ 0.13
LIMS2-202ENST00000355119 SPANXB1Q9NS25 103 aaPredicted RBP15.84■□□□□ 0.13
LIMS2-202ENST00000355119 RS1O15537 224 aa15.83■□□□□ 0.12
LIMS2-202ENST00000355119 C11orf44Q8N8P7 122 aa15.83■□□□□ 0.12
LIMS2-202ENST00000355119 CHD6Q8TD26 2715 aa15.83■□□□□ 0.12
LIMS2-202ENST00000355119 Q6ZSN1 163 aa15.82■□□□□ 0.12
LIMS2-202ENST00000355119 CREBBPQ92793 2442 aa15.82■□□□□ 0.12
LIMS2-202ENST00000355119 IGHV3-53P01767 116 aa15.82■□□□□ 0.12
LIMS2-202ENST00000355119 MRPL16Q9NX20 251 aaKnown RBP15.82■□□□□ 0.12
LIMS2-202ENST00000355119 TSSC4Q9Y5U2 329 aaPredicted RBP15.82■□□□□ 0.12
LIMS2-202ENST00000355119 MXRA5Q9NR99 2828 aa15.81■□□□□ 0.12
LIMS2-202ENST00000355119 SORL1Q92673 2214 aa15.81■□□□□ 0.12
LIMS2-202ENST00000355119 ZNF22P17026 224 aaPredicted RBP15.81■□□□□ 0.12
LIMS2-202ENST00000355119 AMELXQ99217 191 aa15.81■□□□□ 0.12
LIMS2-202ENST00000355119 C16orf95Q9H693 158 aa15.81■□□□□ 0.12
LIMS2-202ENST00000355119 XCL2Q9UBD3 114 aa15.81■□□□□ 0.12
LIMS2-202ENST00000355119 HIST2H2BCQ6DN03 193 aa15.8■□□□□ 0.12
LIMS2-202ENST00000355119 YAE1D1Q9NRH1 226 aa15.8■□□□□ 0.12
LIMS2-202ENST00000355119 A0A0J9YXV3 536 aa15.8■□□□□ 0.12
LIMS2-202ENST00000355119 UBE2D1P51668 147 aa15.8■□□□□ 0.12
LIMS2-202ENST00000355119 KRTAP1-1Q07627 177 aa15.8■□□□□ 0.12
LIMS2-202ENST00000355119 SLC25A29Q8N8R3 303 aa15.8■□□□□ 0.12
LIMS2-202ENST00000355119 CITED2Q99967 270 aaPredicted RBP15.79■□□□□ 0.12
LIMS2-202ENST00000355119 RNASE1P07998 156 aaKnown RBP15.78■□□□□ 0.12
LIMS2-202ENST00000355119 CMC4P56277 68 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms