RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SPAG8Q99932 426 aaPredicted RBP16.36■□□□□ 0.21
NKX2-1-201ENST00000354822 C11orf86A6NJI1 115 aa16.35■□□□□ 0.21
NKX2-1-201ENST00000354822 NAA38Q9BRA0 125 aaKnown RBP16.35■□□□□ 0.21
NKX2-1-201ENST00000354822 SPCS1Q9Y6A9 102 aa16.35■□□□□ 0.21
NKX2-1-201ENST00000354822 TRBV7-3A0A075B6L6 115 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 SCGB2A2Q13296 93 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 DEFB114Q30KQ6 69 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 PTH2Q96A98 100 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 MXRA5Q9NR99 2828 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 DUX3Q96PT4 197 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 SORL1Q92673 2214 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 CREBBPQ92793 2442 aa16.34■□□□□ 0.21
NKX2-1-201ENST00000354822 A8MWV9 139 aa16.33■□□□□ 0.2
NKX2-1-201ENST00000354822 Q6ZSV7 163 aa16.33■□□□□ 0.2
NKX2-1-201ENST00000354822 MAP6D1Q9H9H5 199 aa16.33■□□□□ 0.2
NKX2-1-201ENST00000354822 ZNF815PA8K554 130 aa16.33■□□□□ 0.2
NKX2-1-201ENST00000354822 M0R2P5 195 aa16.33■□□□□ 0.2
NKX2-1-201ENST00000354822 LINC00467Q9BRT7 94 aa16.33■□□□□ 0.2
NKX2-1-201ENST00000354822 RBMY1BA6NDE4 496 aaKnown RBP16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 RBMY1EA6NEQ0 496 aaKnown RBP16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 RBMY1DP0C7P1 496 aaKnown RBP16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 HTN1P15515 57 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 RBX1P62877 108 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 ZNF415Q09FC8 603 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 CD300EQ496F6 205 aaPredicted RBP16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 OCIAD2Q56VL3 154 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 C20orf203Q8NBC4 194 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 DEFB104AQ8WTQ1 72 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 APCP25054 2843 aa16.32■□□□□ 0.2
NKX2-1-201ENST00000354822 C12orf74Q32Q52 190 aa16.31■□□□□ 0.2
NKX2-1-201ENST00000354822 RAX2Q96IS3 184 aa16.31■□□□□ 0.2
NKX2-1-201ENST00000354822 K7ERJ3 54 aa16.31■□□□□ 0.2
NKX2-1-201ENST00000354822 P0DMU3 169 aa16.3■□□□□ 0.2
NKX2-1-201ENST00000354822 FAM231AP0DMU4 169 aa16.3■□□□□ 0.2
NKX2-1-201ENST00000354822 FAM231CP0DMU5 169 aa16.3■□□□□ 0.2
NKX2-1-201ENST00000354822 CLUHP3Q96NS8 147 aa16.3■□□□□ 0.2
NKX2-1-201ENST00000354822 TRAV25A0A0B4J276 109 aa16.3■□□□□ 0.2
NKX2-1-201ENST00000354822 SCGB1D4Q6XE38 83 aa16.3■□□□□ 0.2
NKX2-1-201ENST00000354822 TEX15Q9BXT5 2789 aa16.29■□□□□ 0.2
NKX2-1-201ENST00000354822 NFE4Q86UQ8 179 aa16.29■□□□□ 0.2
NKX2-1-201ENST00000354822 A0A1B0GWB2 263 aa16.28■□□□□ 0.2
NKX2-1-201ENST00000354822 DNAJC9-AS1A6NH13 148 aa16.28■□□□□ 0.2
NKX2-1-201ENST00000354822 TMEM170BQ5T4T1 132 aa16.28■□□□□ 0.2
NKX2-1-201ENST00000354822 IGLL5B9A064 214 aa16.27■□□□□ 0.2
NKX2-1-201ENST00000354822 EMP1P54849 157 aa16.27■□□□□ 0.2
NKX2-1-201ENST00000354822 SPXQ9BT56 116 aa16.27■□□□□ 0.2
NKX2-1-201ENST00000354822 K7ERU9 68 aa16.27■□□□□ 0.19
NKX2-1-201ENST00000354822 ZNRF2Q8NHG8 242 aa16.27■□□□□ 0.19
NKX2-1-201ENST00000354822 LINC01587Q99440 93 aa16.27■□□□□ 0.19
NKX2-1-201ENST00000354822 TMEM238LA0A1B0GVL6 79 aa16.26■□□□□ 0.19
NKX2-1-201ENST00000354822 A6NJY4 79 aa16.26■□□□□ 0.19
NKX2-1-201ENST00000354822 INSP01308 110 aa16.26■□□□□ 0.19
NKX2-1-201ENST00000354822 TNFRSF18Q9Y5U5 241 aa16.26■□□□□ 0.19
NKX2-1-201ENST00000354822 KMT2BQ9UMN6 2715 aaPredicted RBP16.25■□□□□ 0.19
NKX2-1-201ENST00000354822 PYGO1Q9Y3Y4 419 aa16.25■□□□□ 0.19
NKX2-1-201ENST00000354822 RHODO00212 210 aa16.24■□□□□ 0.19
NKX2-1-201ENST00000354822 KRTAP1-1Q07627 177 aa16.24■□□□□ 0.19
NKX2-1-201ENST00000354822 SRSF9Q13242 221 aaKnown RBP eCLIP16.24■□□□□ 0.19
NKX2-1-201ENST00000354822 ZNF479Q96JC4 524 aa16.24■□□□□ 0.19
NKX2-1-201ENST00000354822 VCX2Q9H322 139 aa16.24■□□□□ 0.19
NKX2-1-201ENST00000354822 CRYBA4P53673 196 aa16.23■□□□□ 0.19
NKX2-1-201ENST00000354822 FHL3Q13643 280 aa16.23■□□□□ 0.19
NKX2-1-201ENST00000354822 IGHV3-73A0A0B4J1V6 119 aa16.23■□□□□ 0.19
NKX2-1-201ENST00000354822 PLEKHB2Q96CS7 222 aa16.23■□□□□ 0.19
NKX2-1-201ENST00000354822 TENM4Q6N022 2769 aa16.22■□□□□ 0.19
NKX2-1-201ENST00000354822 CFAP126Q5VTH2 177 aa16.22■□□□□ 0.19
NKX2-1-201ENST00000354822 C11orf72Q8NBR9 251 aa16.22■□□□□ 0.19
NKX2-1-201ENST00000354822 IGLV4-3A0A075B6K6 122 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 BEAN1Q3B7T3 259 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 OPRPNQ99935 248 aaPredicted RBP16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 YAE1D1Q9NRH1 226 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 ITPR3Q14573 2671 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 A0A0J9YY99 117 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 CCL24O00175 119 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 RRN3P1Q2M238 152 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 DNAJC30Q96LL9 226 aa16.21■□□□□ 0.19
NKX2-1-201ENST00000354822 PROK1P58294 105 aa16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 SPANXB1Q9NS25 103 aaPredicted RBP16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 J3QQQ9 107 aa16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 PRM2P04554 102 aa16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 LGALS3P17931 250 aaKnown RBP16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 RNF151Q2KHN1 245 aa16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 ESM1Q9NQ30 184 aa16.2■□□□□ 0.18
NKX2-1-201ENST00000354822 TMEM223A0PJW6 202 aa16.19■□□□□ 0.18
NKX2-1-201ENST00000354822 STHQ8IWL8 128 aa16.19■□□□□ 0.18
NKX2-1-201ENST00000354822 CHD6Q8TD26 2715 aa16.19■□□□□ 0.18
NKX2-1-201ENST00000354822 LEPROTO15243 131 aa16.19■□□□□ 0.18
NKX2-1-201ENST00000354822 CD28P10747 220 aa16.19■□□□□ 0.18
NKX2-1-201ENST00000354822 ODF3L2Q3SX64 289 aa16.19■□□□□ 0.18
NKX2-1-201ENST00000354822 IGHV3-53P01767 116 aa16.18■□□□□ 0.18
NKX2-1-201ENST00000354822 SLC25A29Q8N8R3 303 aa16.18■□□□□ 0.18
NKX2-1-201ENST00000354822 AMELXQ99217 191 aa16.17■□□□□ 0.18
NKX2-1-201ENST00000354822 RS1O15537 224 aa16.17■□□□□ 0.18
NKX2-1-201ENST00000354822 TSSC4Q9Y5U2 329 aaPredicted RBP16.17■□□□□ 0.18
NKX2-1-201ENST00000354822 MYO9AB2RTY4 2548 aa16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 UBE2D1P51668 147 aa16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 CMC4P56277 68 aaPredicted RBP16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 TSPEAR-AS2P59090 65 aa16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 A0A1W2PRX2 142 aa16.16■□□□□ 0.18
NKX2-1-201ENST00000354822 ZNF22P17026 224 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms