RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 TRBV19A0A075B6N1 114 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 SAA4P35542 130 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 HERVK_113P61574 105 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 KRTAP1-3Q8IUG1 177 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 SPTBN1Q01082 2364 aaKnown RBP8.24□□□□□ -1.09
SND1-201ENST00000354725 RPL27AP46776 148 aaKnown RBP8.24□□□□□ -1.09
SND1-201ENST00000354725 TWIST1Q15672 202 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 C17orf77Q96MU5 243 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 IGHV1-3A0A0C4DH29 117 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 NDUFB3O43676 98 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 PRSS1P07477 247 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 HLA-DMBP28068 263 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 DAZ2Q13117 558 aaKnown RBP8.24□□□□□ -1.09
SND1-201ENST00000354725 DAZ4Q86SG3 579 aaKnown RBP8.24□□□□□ -1.09
SND1-201ENST00000354725 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
SND1-201ENST00000354725 DAZ1Q9NQZ3 744 aaKnown RBP8.24□□□□□ -1.09
SND1-201ENST00000354725 DAZ3Q9NR90 486 aaKnown RBP8.24□□□□□ -1.09
SND1-201ENST00000354725 K7EIM0 57 aa8.23□□□□□ -1.09
SND1-201ENST00000354725 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
SND1-201ENST00000354725 BUB1B-PAK6H3BSN5 160 aa8.23□□□□□ -1.09
SND1-201ENST00000354725 HCP5Q6MZN7 132 aa8.23□□□□□ -1.09
SND1-201ENST00000354725 NCBP2LA6PVI3 153 aaKnown RBP8.23□□□□□ -1.09
SND1-201ENST00000354725 NDUFA11Q86Y39 141 aa8.23□□□□□ -1.09
SND1-201ENST00000354725 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
SND1-201ENST00000354725 H3BMM0 161 aa8.22□□□□□ -1.09
SND1-201ENST00000354725 RIGQ13278 110 aa8.22□□□□□ -1.09
SND1-201ENST00000354725 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
SND1-201ENST00000354725 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
SND1-201ENST00000354725 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
SND1-201ENST00000354725 D6R8Y8 96 aa8.22□□□□□ -1.09
SND1-201ENST00000354725 DLX1P56177 255 aa8.22□□□□□ -1.09
SND1-201ENST00000354725 ANKRD17O75179 2603 aaKnown RBP8.21□□□□□ -1.09
SND1-201ENST00000354725 F8W735 103 aaPredicted RBP8.21□□□□□ -1.09
SND1-201ENST00000354725 BUB3O43684 328 aa8.21□□□□□ -1.09
SND1-201ENST00000354725 ARMS2P0C7Q2 107 aa8.21□□□□□ -1.09
SND1-201ENST00000354725 KLK9Q2XQG4 91 aa8.21□□□□□ -1.09
SND1-201ENST00000354725 KLK9Q9UKQ9 250 aa8.21□□□□□ -1.09
SND1-201ENST00000354725 NDUFA3O95167 84 aa8.21□□□□□ -1.1
SND1-201ENST00000354725 PDE6HQ13956 83 aa8.21□□□□□ -1.1
SND1-201ENST00000354725 ZNF491Q8N8L2 437 aa8.21□□□□□ -1.1
SND1-201ENST00000354725 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.1
SND1-201ENST00000354725 NPBQ8NG41 125 aa8.2□□□□□ -1.1
SND1-201ENST00000354725 SRSF12Q8WXF0 261 aaKnown RBP8.2□□□□□ -1.1
SND1-201ENST00000354725 ABCA12Q86UK0 2595 aa8.2□□□□□ -1.1
SND1-201ENST00000354725 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
SND1-201ENST00000354725 SS18Q15532 418 aa8.19□□□□□ -1.1
SND1-201ENST00000354725 AGPAT4-IT1Q9H0P7 198 aa8.19□□□□□ -1.1
SND1-201ENST00000354725 CNFNQ9BYD5 112 aa8.19□□□□□ -1.1
SND1-201ENST00000354725 ORMDL3Q8N138 153 aa8.19□□□□□ -1.1
SND1-201ENST00000354725 CCL17Q92583 94 aa8.19□□□□□ -1.1
SND1-201ENST00000354725 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
SND1-201ENST00000354725 IGHV3-72A0A0B4J1Y9 119 aa8.18□□□□□ -1.1
SND1-201ENST00000354725 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
SND1-201ENST00000354725 TRAV41A0A0B4J266 112 aa8.18□□□□□ -1.1
SND1-201ENST00000354725 SLC25A16P16260 332 aa8.18□□□□□ -1.1
SND1-201ENST00000354725 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
SND1-201ENST00000354725 PKDREJQ9NTG1 2253 aa8.18□□□□□ -1.1
SND1-201ENST00000354725 AVPP01185 164 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
SND1-201ENST00000354725 PRNTQ86SH4 94 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 A0A096LNT2 108 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 LYZP61626 148 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
SND1-201ENST00000354725 PAPPA-AS1Q5QFB9 102 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 TMEM170BQ5T4T1 132 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 PRRC2AP48634 2157 aaKnown RBP8.16□□□□□ -1.1
SND1-201ENST00000354725 CR1P17927 2039 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 IGHV3-21A0A0B4J1V1 117 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 CFC1BP0CG36 223 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 CFC1P0CG37 223 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 FAM104BQ5XKR9 115 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 POLQO75417 2590 aa8.16□□□□□ -1.1
SND1-201ENST00000354725 HOXD3P31249 432 aaPredicted RBP8.15□□□□□ -1.1
SND1-201ENST00000354725 HILS1P60008 231 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.1
SND1-201ENST00000354725 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 Q8N6K4 173 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 MDFIQ99750 246 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 ABCA4P78363 2273 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 ATOX1O00244 68 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
SND1-201ENST00000354725 ITPR3Q14573 2671 aa8.15□□□□□ -1.11
SND1-201ENST00000354725 ATXN8Q156A1 80 aa8.15□□□□□ -1.11
SND1-201ENST00000354725 ECSCRQ19T08 205 aa8.15□□□□□ -1.11
SND1-201ENST00000354725 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.11
SND1-201ENST00000354725 APELAP0DMC3 54 aa8.14□□□□□ -1.11
SND1-201ENST00000354725 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
SND1-201ENST00000354725 MRPL51Q4U2R6 128 aaKnown RBP8.14□□□□□ -1.11
SND1-201ENST00000354725 RNF182Q8N6D2 247 aa8.14□□□□□ -1.11
SND1-201ENST00000354725 IGHV4-39P01824 125 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms