RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CEMP1Q6PRD7 247 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-201ENST00000352993 FAM110DQ8TAY7 271 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-201ENST00000352993 MUC4Q99102 2169 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 NACAE9PAV3 2078 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 CD28P10747 220 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 HTN1P15515 57 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 POLR2KP53803 58 aaKnown RBP5.72□□□□□ -1.49
BRCA1-201ENST00000352993 KLRB1Q12918 225 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 RS1O15537 224 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 IGHV3-30-3P0DP02 117 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 LINC01587Q99440 93 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 MGAQ8IWI9 3026 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 A8MZ25 164 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 IGHV3-11P01762 117 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 HERVK_113P63121 156 aa5.72□□□□□ -1.49
BRCA1-201ENST00000352993 SPTAN1Q13813 2472 aaKnown RBP5.72□□□□□ -1.49
BRCA1-201ENST00000352993 USP24Q9UPU5 2620 aa5.71□□□□□ -1.49
BRCA1-201ENST00000352993 TRAV41A0A0B4J266 112 aa5.71□□□□□ -1.49
BRCA1-201ENST00000352993 I3L3M4 83 aa5.71□□□□□ -1.49
BRCA1-201ENST00000352993 NPFFO15130 113 aa5.71□□□□□ -1.49
BRCA1-201ENST00000352993 Q8N9W7 124 aa5.71□□□□□ -1.49
BRCA1-201ENST00000352993 LENEPQ9Y5L5 61 aa5.71□□□□□ -1.49
BRCA1-201ENST00000352993 ANKHD1Q8IWZ3 2542 aaKnown RBP5.71□□□□□ -1.5
BRCA1-201ENST00000352993 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
BRCA1-201ENST00000352993 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
BRCA1-201ENST00000352993 NDUFA7O95182 113 aa5.71□□□□□ -1.5
BRCA1-201ENST00000352993 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.5
BRCA1-201ENST00000352993 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-201ENST00000352993 CREBBPQ92793 2442 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 TMEM219Q86XT9 240 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 C3orf22Q8N5N4 141 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 CSDC2Q9Y534 153 aaKnown RBP5.7□□□□□ -1.5
BRCA1-201ENST00000352993 SPENQ96T58 3664 aaKnown RBP5.7□□□□□ -1.5
BRCA1-201ENST00000352993 TRBV7-1A0A0A6YYK4 115 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 GAGE2AQ6NT46 116 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 UNQ9165/PRO28630Q6UXU0 137 aa5.7□□□□□ -1.5
BRCA1-201ENST00000352993 IGHV4OR15-8A0A075B7B6 117 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 A0A087WW49 117 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 LST1O00453 97 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.69□□□□□ -1.53e-7■■■■■ 41.1
BRCA1-201ENST00000352993 TRAV12-2A0A075B6T6 113 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 ITPR1Q14643 2758 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 IGHV3OR16-10A0A075B7F0 116 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 UQCRQO14949 82 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 TRBV12-3P01733 135 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 LINC00315P59091 139 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 C20orf203Q8NBC4 194 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 NRGNQ92686 78 aa5.69□□□□□ -1.5
BRCA1-201ENST00000352993 IGLV4-3A0A075B6K6 122 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 TRBV27A0A0K0K1C4 114 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 TRBV7-7A0A0K0K1E9 115 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 J3KT08 172 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 M0R1W7 72 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 IGHV1-69P01742 117 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 LY6G5BQ8NDX9 201 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 ITLN2Q8WWU7 325 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-201ENST00000352993 KLK9Q9UKQ9 250 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 KIF25-AS1Q9Y6Z4 181 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 RIF1Q5UIP0 2472 aaKnown RBP5.68□□□□□ -1.5
BRCA1-201ENST00000352993 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 ODF3BA8MYP8 253 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 MED14OSP0DP75 135 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 RHOHQ15669 191 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 MIAQ16674 131 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 MINOS1Q5TGZ0 78 aa5.68□□□□□ -1.5
BRCA1-201ENST00000352993 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-201ENST00000352993 TRAV13-1A0A0B4J241 112 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 CIRBPQ14011 172 aaKnown RBP5.67□□□□□ -1.5
BRCA1-201ENST00000352993 LINC00643Q86TS7 51 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 hADV29S1A0JD25 119 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 ACYP1P07311 99 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 PF4V1P10720 104 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 Q8N6K4 173 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 NOTCH3Q9UM47 2321 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 SMIM9A6NGZ8 99 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 BAALC-AS2P0C853 105 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 EBI3Q14213 229 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 TMEM61Q8N0U2 210 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 MINOS1-NBL1R4GNA1 71 aa5.67□□□□□ -1.5
BRCA1-201ENST00000352993 IGHV1-58A0A0C4DH39 117 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 SAA4P35542 130 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 DAZ2Q13117 558 aaKnown RBP5.66□□□□□ -1.5
BRCA1-201ENST00000352993 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 DAZ4Q86SG3 579 aaKnown RBP5.66□□□□□ -1.5
BRCA1-201ENST00000352993 OR13C6PQ8NH95 151 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 DAZ1Q9NQZ3 744 aaKnown RBP5.66□□□□□ -1.5
BRCA1-201ENST00000352993 DAZ3Q9NR90 486 aaKnown RBP5.66□□□□□ -1.5
BRCA1-201ENST00000352993 M0QY20 66 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 U3KQE9 123 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 NSUN5P1Q3KNT7 163 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 IMUPQ9GZP8 106 aa5.66□□□□□ -1.5
BRCA1-201ENST00000352993 A0A0J9YX75 114 aa5.65□□□□□ -1.5
BRCA1-201ENST00000352993 NXPH4O95158 308 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms