RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 K7EQG2 157 aa12.28□□□□□ -0.44
PDAP1-201ENST00000350498 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDAP1-201ENST00000350498 Q6YL49 198 aa12.28□□□□□ -0.44
PDAP1-201ENST00000350498 ZNF580Q9UK33 172 aa12.28□□□□□ -0.44
PDAP1-201ENST00000350498 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
PDAP1-201ENST00000350498 AZU1P20160 251 aa12.28□□□□□ -0.44
PDAP1-201ENST00000350498 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
PDAP1-201ENST00000350498 MRPL16Q9NX20 251 aaKnown RBP12.28□□□□□ -0.44
PDAP1-201ENST00000350498 F8W1H4 67 aa12.27□□□□□ -0.45
PDAP1-201ENST00000350498 RBMY1A1P0DJD3 496 aaKnown RBP12.27□□□□□ -0.45
PDAP1-201ENST00000350498 RBMY1CP0DJD4 496 aa12.27□□□□□ -0.45
PDAP1-201ENST00000350498 RBMY1FQ15415 496 aaKnown RBP12.27□□□□□ -0.45
PDAP1-201ENST00000350498 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.45
PDAP1-201ENST00000350498 A0A1B0GWB2 263 aa12.27□□□□□ -0.45
PDAP1-201ENST00000350498 IGIPA6NJ69 53 aa12.27□□□□□ -0.45
PDAP1-201ENST00000350498 ZNRF2Q8NHG8 242 aa12.27□□□□□ -0.45
PDAP1-201ENST00000350498 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
PDAP1-201ENST00000350498 POLR2KP53803 58 aaKnown RBP12.26□□□□□ -0.45
PDAP1-201ENST00000350498 Q5PR19 223 aa12.26□□□□□ -0.45
PDAP1-201ENST00000350498 IGHV3-16A0A0C4DH30 117 aa12.26□□□□□ -0.45
PDAP1-201ENST00000350498 LOC107984156A0A0G2JMH3 177 aa12.26□□□□□ -0.45
PDAP1-201ENST00000350498 ARL17AQ8IVW1 177 aa12.26□□□□□ -0.45
PDAP1-201ENST00000350498 Q96MF0 132 aa12.26□□□□□ -0.45
PDAP1-201ENST00000350498 IGHV3-64A0A075B6Q5 118 aa12.25□□□□□ -0.45
PDAP1-201ENST00000350498 FSHBP01225 129 aa12.25□□□□□ -0.45
PDAP1-201ENST00000350498 TCTEX1D4Q5JR98 221 aa12.25□□□□□ -0.45
PDAP1-201ENST00000350498 TMEM170BQ5T4T1 132 aa12.25□□□□□ -0.45
PDAP1-201ENST00000350498 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
PDAP1-201ENST00000350498 PTH2Q96A98 100 aa12.25□□□□□ -0.45
PDAP1-201ENST00000350498 MTORP42345 2549 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 NXPH4O95158 308 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 TSPAN13O95857 204 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 SAMD13Q5VXD3 122 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 C11orf44Q8N8P7 122 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 MED14OSP0DP75 135 aa12.24□□□□□ -0.45
PDAP1-201ENST00000350498 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
PDAP1-201ENST00000350498 KHDC1LQ5JSQ8 128 aa12.23□□□□□ -0.45
PDAP1-201ENST00000350498 ITPR2Q14571 2701 aa12.23□□□□□ -0.45
PDAP1-201ENST00000350498 A0A0J9YY99 117 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 PSMB2P49721 201 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 PROK1P58294 105 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 ZNF418Q8TF45 676 aaPredicted RBP12.22□□□□□ -0.45
PDAP1-201ENST00000350498 Q9UF83 564 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 JMJD1CQ15652 2540 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 J3QLI3 93 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 PMVKQ15126 192 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 ZNF56Q15929 161 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
PDAP1-201ENST00000350498 UBE2D1P51668 147 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 DEFB131AP59861 70 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 DEFB113Q30KQ7 82 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 UBE2E2Q96LR5 201 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 C9orf85Q96MD7 179 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 NACAE9PAV3 2078 aa12.21□□□□□ -0.45
PDAP1-201ENST00000350498 LINC01619G3V211 115 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 P0DMU3 169 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 RBMY1BA6NDE4 496 aaKnown RBP12.2□□□□□ -0.46
PDAP1-201ENST00000350498 RBMY1EA6NEQ0 496 aaKnown RBP12.2□□□□□ -0.46
PDAP1-201ENST00000350498 RBMY1DP0C7P1 496 aaKnown RBP12.2□□□□□ -0.46
PDAP1-201ENST00000350498 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
PDAP1-201ENST00000350498 VCYO14598 125 aa12.19□□□□□ -0.46
PDAP1-201ENST00000350498 ELANEP08246 267 aa12.19□□□□□ -0.46
PDAP1-201ENST00000350498 ZNF876PQ49A33 203 aa12.19□□□□□ -0.46
PDAP1-201ENST00000350498 CFC1BP0CG36 223 aa12.18□□□□□ -0.46
PDAP1-201ENST00000350498 CFC1P0CG37 223 aa12.18□□□□□ -0.46
PDAP1-201ENST00000350498 CFAP126Q5VTH2 177 aa12.18□□□□□ -0.46
PDAP1-201ENST00000350498 NDUFA11Q86Y39 141 aa12.18□□□□□ -0.46
PDAP1-201ENST00000350498 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
PDAP1-201ENST00000350498 AMELXQ99217 191 aa12.18□□□□□ -0.46
PDAP1-201ENST00000350498 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
PDAP1-201ENST00000350498 M0QY20 66 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 PPP1R17O96001 155 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 DLX4Q92988 240 aaPredicted RBP12.17□□□□□ -0.46
PDAP1-201ENST00000350498 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 LGALS9O00182 355 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
PDAP1-201ENST00000350498 FHL3Q13643 280 aa12.16□□□□□ -0.46
PDAP1-201ENST00000350498 PDZD2O15018 2839 aa12.16□□□□□ -0.46
PDAP1-201ENST00000350498 EIF4EBP3O60516 100 aaPredicted RBP12.16□□□□□ -0.46
PDAP1-201ENST00000350498 TCL1BO95988 128 aa12.16□□□□□ -0.46
PDAP1-201ENST00000350498 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
PDAP1-201ENST00000350498 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 ADARB2-AS1A8MUL3 147 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 J3QQQ9 107 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 CEMP1Q6PRD7 247 aaPredicted RBP12.15□□□□□ -0.46
PDAP1-201ENST00000350498 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 TMEM238LA0A1B0GVL6 79 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 A6NJY4 79 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms