RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 VCYO14598 125 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 C3orf79P0CE67 100 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 ORMDL2Q53FV1 153 aa13.39□□□□□ -0.27
PTN-201ENST00000348225 SDHAF1A6NFY7 115 aa13.38□□□□□ -0.27
PTN-201ENST00000348225 TCAPO15273 167 aa13.38□□□□□ -0.27
PTN-201ENST00000348225 CIDEAO60543 219 aa13.38□□□□□ -0.27
PTN-201ENST00000348225 IGHV3-53P01767 116 aa13.38□□□□□ -0.27
PTN-201ENST00000348225 BTF3P20290 206 aaKnown RBP13.38□□□□□ -0.27
PTN-201ENST00000348225 POLR2KP53803 58 aaKnown RBP13.38□□□□□ -0.27
PTN-201ENST00000348225 TRGV2A0A075B6R0 118 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 GAGE12BA1L429 117 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 GAGE7O76087 117 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 GAGE12FP0CL80 117 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 GAGE12GP0CL81 117 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 GAGE12IP0CL82 117 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 EMP1P54849 157 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 MDFIQ99750 246 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
PTN-201ENST00000348225 OR11H2Q8NH07 326 aa13.36□□□□□ -0.27
PTN-201ENST00000348225 TRBV27A0A0K0K1C4 114 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 NUDT3O95989 172 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 RNF183Q96D59 192 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 DNAH3Q8TD57 4116 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 MIFP14174 115 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 LINC00173Q6ZV60 143 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 TNFRSF18Q9Y5U5 241 aa13.35□□□□□ -0.27
PTN-201ENST00000348225 G0S2P27469 103 aa13.34□□□□□ -0.27
PTN-201ENST00000348225 Q6ZSN1 163 aa13.34□□□□□ -0.27
PTN-201ENST00000348225 NEGR1Q7Z3B1 354 aa13.33□□□□□ -0.28
PTN-201ENST00000348225 PKD1L1Q8TDX9 2849 aa13.33□□□□□ -0.28
PTN-201ENST00000348225 LYRM9A8MSI8 78 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 SYS1-DBNDD2H3BUS1 97 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 I3L3M4 83 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 P0DMU3 169 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 FAM231AP0DMU4 169 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 FAM231CP0DMU5 169 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 S100A12P80511 92 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
PTN-201ENST00000348225 C20orf202A1L168 122 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 KRTAP21-3Q3LHN1 58 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 PET117Q6UWS5 81 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 LINC00612Q8N6U2 182 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 C18orf15Q96N68 181 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 TRBV10-1A0A0K0K1A3 114 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 K7EQD1 137 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 Q8N976 141 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 NEXN-AS1Q8NBZ9 246 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 IFI27L1Q96BM0 104 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 TP53TG1Q9Y2A0 90 aa13.31□□□□□ -0.28
PTN-201ENST00000348225 LINC01549A6NIU2 74 aa13.3□□□□□ -0.28
PTN-201ENST00000348225 ATP5LO75964 103 aa13.3□□□□□ -0.28
PTN-201ENST00000348225 RHOHQ15669 191 aa13.3□□□□□ -0.28
PTN-201ENST00000348225 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
PTN-201ENST00000348225 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
PTN-201ENST00000348225 Q8NAQ8 132 aa13.29□□□□□ -0.28
PTN-201ENST00000348225 TRGV4A0A0C4DH28 118 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 FAM222AQ5U5X8 452 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 H0Y8G0 127 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 RPL36AP83881 106 aaKnown RBP13.28□□□□□ -0.28
PTN-201ENST00000348225 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 TEX43Q6ZNM6 134 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
PTN-201ENST00000348225 CYSLTR1Q9Y271 337 aa13.28□□□□□ -0.28
PTN-201ENST00000348225 TRBV6-4A0A1B0GX49 114 aa13.27□□□□□ -0.29
PTN-201ENST00000348225 TSHBP01222 138 aa13.27□□□□□ -0.29
PTN-201ENST00000348225 SLC25A29Q8N8R3 303 aa13.27□□□□□ -0.29
PTN-201ENST00000348225 DKK2Q9UBU2 259 aa13.27□□□□□ -0.29
PTN-201ENST00000348225 TRBV7-3A0A075B6L6 115 aa13.26□□□□□ -0.29
PTN-201ENST00000348225 SCGB3A1Q96QR1 104 aa13.25□□□□□ -0.29
PTN-201ENST00000348225 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.24□□□□□ -0.29
PTN-201ENST00000348225 DEFB4AO15263 64 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 FHL2Q14192 279 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 KPRPQ5T749 579 aaPredicted RBP13.24□□□□□ -0.29
PTN-201ENST00000348225 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 ZNRF2Q8NHG8 242 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 Q9UF83 564 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 LGALS9CQ6DKI2 356 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 PRADC1Q9BSG0 188 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 VAMP8Q9BV40 100 aa13.24□□□□□ -0.29
PTN-201ENST00000348225 PRSS1P07477 247 aa13.23□□□□□ -0.29
PTN-201ENST00000348225 COTL1Q14019 142 aa13.23□□□□□ -0.29
PTN-201ENST00000348225 Q6ZN92 141 aa13.23□□□□□ -0.29
PTN-201ENST00000348225 ERASQ7Z444 233 aa13.23□□□□□ -0.29
PTN-201ENST00000348225 DEFB104AQ8WTQ1 72 aa13.23□□□□□ -0.29
PTN-201ENST00000348225 DAD1P61803 113 aa13.22□□□□□ -0.29
PTN-201ENST00000348225 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
PTN-201ENST00000348225 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
PTN-201ENST00000348225 NBEAL2Q6ZNJ1 2754 aa13.22□□□□□ -0.29
PTN-201ENST00000348225 C20orf203Q8NBC4 194 aa13.21□□□□□ -0.29
PTN-201ENST00000348225 PHLDA1Q8WV24 401 aaPredicted RBP13.21□□□□□ -0.29
PTN-201ENST00000348225 GAGE12JA6NER3 117 aa13.21□□□□□ -0.3
PTN-201ENST00000348225 UBE2D3P61077 147 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms