RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 RBFOX3A6NFN3 312 aa13.33□□□□□ -0.28
CEACAM3-201ENST00000344550 F5H697 171 aa13.33□□□□□ -0.28
CEACAM3-201ENST00000344550 H7C1H1 209 aa13.33□□□□□ -0.28
CEACAM3-201ENST00000344550 TRBV20OR9-2A0A075B6H5 130 aa13.32□□□□□ -0.28
CEACAM3-201ENST00000344550 KRTAP10-1P60331 282 aa13.32□□□□□ -0.28
CEACAM3-201ENST00000344550 Q0VG73 95 aa13.32□□□□□ -0.28
CEACAM3-201ENST00000344550 DNAJC30Q96LL9 226 aa13.32□□□□□ -0.28
CEACAM3-201ENST00000344550 TMEM70Q9BUB7 260 aa13.32□□□□□ -0.28
CEACAM3-201ENST00000344550 TMEM250H0YL14 139 aa13.31□□□□□ -0.28
CEACAM3-201ENST00000344550 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
CEACAM3-201ENST00000344550 Q8N3U1 123 aa13.31□□□□□ -0.28
CEACAM3-201ENST00000344550 NDUFS6O75380 124 aaKnown RBP13.3□□□□□ -0.28
CEACAM3-201ENST00000344550 TRGC1P0CF51 173 aa13.3□□□□□ -0.28
CEACAM3-201ENST00000344550 XGP55808 180 aa13.3□□□□□ -0.28
CEACAM3-201ENST00000344550 LYPD6BQ8NI32 183 aa13.3□□□□□ -0.28
CEACAM3-201ENST00000344550 MUC21A0A0G2JKD1 596 aa13.29□□□□□ -0.28
CEACAM3-201ENST00000344550 MUC21A0A140T8X8 626 aa13.29□□□□□ -0.28
CEACAM3-201ENST00000344550 KLK12Q9UKR0 248 aa13.29□□□□□ -0.28
CEACAM3-201ENST00000344550 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
CEACAM3-201ENST00000344550 TPPP3Q9BW30 176 aa13.28□□□□□ -0.28
CEACAM3-201ENST00000344550 CNFNQ9BYD5 112 aa13.28□□□□□ -0.28
CEACAM3-201ENST00000344550 TMEM262E9PQX1 116 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 M0QY20 66 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 GZMBP10144 247 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 CTRLP40313 264 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 Q8N976 141 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 NUDT11Q96G61 164 aa13.27□□□□□ -0.29
CEACAM3-201ENST00000344550 EPM2AB3EWF7 344 aa13.26□□□□□ -0.29
CEACAM3-201ENST00000344550 FRZBQ92765 325 aa13.26□□□□□ -0.29
CEACAM3-201ENST00000344550 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
CEACAM3-201ENST00000344550 SSTP61278 116 aa13.25□□□□□ -0.29
CEACAM3-201ENST00000344550 LYZL1Q6UWQ5 148 aa13.25□□□□□ -0.29
CEACAM3-201ENST00000344550 ALKAL2Q6UX46 152 aa13.25□□□□□ -0.29
CEACAM3-201ENST00000344550 OCC1Q8TAD7 63 aa13.25□□□□□ -0.29
CEACAM3-201ENST00000344550 DPH3P1Q9H4G8 78 aa13.25□□□□□ -0.29
CEACAM3-201ENST00000344550 RPP21Q9H633 154 aaKnown RBP13.25□□□□□ -0.29
CEACAM3-201ENST00000344550 TRBV25-1A0A075B6N4 114 aa13.24□□□□□ -0.29
CEACAM3-201ENST00000344550 IGKV2D-24A0A075B6R9 120 aa13.24□□□□□ -0.29
CEACAM3-201ENST00000344550 NTF3P20783 257 aa13.24□□□□□ -0.29
CEACAM3-201ENST00000344550 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
CEACAM3-201ENST00000344550 CHCHD5Q9BSY4 110 aa13.24□□□□□ -0.29
CEACAM3-201ENST00000344550 ABCA13Q86UQ4 5058 aa13.23□□□□□ -0.29
CEACAM3-201ENST00000344550 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
CEACAM3-201ENST00000344550 SUMO4Q6EEV6 95 aa13.23□□□□□ -0.29
CEACAM3-201ENST00000344550 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
CEACAM3-201ENST00000344550 C1orf43Q9BWL3 253 aa13.23□□□□□ -0.29
CEACAM3-201ENST00000344550 CRPP02741 224 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 MGPP08493 103 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 MIAQ16674 131 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 C14orf177Q52M58 125 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 FAM231DQ6ZW35 169 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 NIT2Q9NQR4 276 aa13.22□□□□□ -0.29
CEACAM3-201ENST00000344550 IGHV1-24A0A0C4DH33 117 aa13.21□□□□□ -0.29
CEACAM3-201ENST00000344550 K7EN84 100 aa13.21□□□□□ -0.29
CEACAM3-201ENST00000344550 WFDC2Q14508 124 aa13.21□□□□□ -0.29
CEACAM3-201ENST00000344550 MPV17L2Q567V2 206 aa13.21□□□□□ -0.29
CEACAM3-201ENST00000344550 BAALCQ8WXS3 180 aa13.21□□□□□ -0.29
CEACAM3-201ENST00000344550 PGLYRP4Q96LB8 373 aa13.21□□□□□ -0.29
CEACAM3-201ENST00000344550 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
CEACAM3-201ENST00000344550 CT83Q5H943 113 aa13.2□□□□□ -0.3
CEACAM3-201ENST00000344550 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
CEACAM3-201ENST00000344550 RNASE7Q9H1E1 156 aaKnown RBP13.2□□□□□ -0.3
CEACAM3-201ENST00000344550 PRR34Q9NV39 138 aa13.2□□□□□ -0.3
CEACAM3-201ENST00000344550 A8MWL6 223 aa13.19□□□□□ -0.3
CEACAM3-201ENST00000344550 TWIST1Q15672 202 aa13.19□□□□□ -0.3
CEACAM3-201ENST00000344550 TEX261Q6UWH6 196 aa13.19□□□□□ -0.3
CEACAM3-201ENST00000344550 SMIM15Q7Z3B0 74 aa13.19□□□□□ -0.3
CEACAM3-201ENST00000344550 C15orf54Q8N8G6 183 aa13.19□□□□□ -0.3
CEACAM3-201ENST00000344550 A0A1B0GUV1 79 aa13.18□□□□□ -0.3
CEACAM3-201ENST00000344550 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
CEACAM3-201ENST00000344550 Q6ZSA8 131 aa13.18□□□□□ -0.3
CEACAM3-201ENST00000344550 FAM229AH3BQW9 127 aa13.17□□□□□ -0.3
CEACAM3-201ENST00000344550 LECT2O14960 151 aa13.17□□□□□ -0.3
CEACAM3-201ENST00000344550 RBX1P62877 108 aa13.17□□□□□ -0.3
CEACAM3-201ENST00000344550 EIF5A2Q9GZV4 153 aaKnown RBP13.17□□□□□ -0.3
CEACAM3-201ENST00000344550 GATCO43716 136 aaKnown RBP13.16□□□□□ -0.3
CEACAM3-201ENST00000344550 NKX2-5P52952 324 aaPredicted RBP13.16□□□□□ -0.3
CEACAM3-201ENST00000344550 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
CEACAM3-201ENST00000344550 FAM231BA6NCW3 169 aa13.15□□□□□ -0.3
CEACAM3-201ENST00000344550 Q5VSD8 79 aa13.15□□□□□ -0.3
CEACAM3-201ENST00000344550 GTSF1Q8WW33 167 aa13.15□□□□□ -0.3
CEACAM3-201ENST00000344550 TMEM243Q9BU79 118 aa13.15□□□□□ -0.3
CEACAM3-201ENST00000344550 SMIM7Q9BQ49 75 aa13.14□□□□□ -0.31
CEACAM3-201ENST00000344550 GFRA4Q9GZZ7 299 aa13.14□□□□□ -0.31
CEACAM3-201ENST00000344550 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
CEACAM3-201ENST00000344550 TRAV8-4A0A0B4J246 113 aa13.13□□□□□ -0.31
CEACAM3-201ENST00000344550 GAGE6Q13070 117 aa13.13□□□□□ -0.31
CEACAM3-201ENST00000344550 COTL1Q14019 142 aa13.13□□□□□ -0.31
CEACAM3-201ENST00000344550 NCR2O95944 276 aa13.12□□□□□ -0.31
CEACAM3-201ENST00000344550 LINC01551Q86U37 167 aa13.12□□□□□ -0.31
CEACAM3-201ENST00000344550 LINC00269Q8N2A0 174 aa13.12□□□□□ -0.31
CEACAM3-201ENST00000344550 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
CEACAM3-201ENST00000344550 BORCS7Q96B45 105 aa13.12□□□□□ -0.31
CEACAM3-201ENST00000344550 FAM30AQ9NZY2 134 aa13.12□□□□□ -0.31
CEACAM3-201ENST00000344550 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
CEACAM3-201ENST00000344550 DGAT2L7PQ6IED9 249 aa13.11□□□□□ -0.31
CEACAM3-201ENST00000344550 OSTCQ9NRP0 149 aa13.11□□□□□ -0.31
CEACAM3-201ENST00000344550 ZNF727A8MUV8 499 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms