RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PHF5AQ7RTV0 110 aaKnown RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 SAA4P35542 130 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 TP53AIP1Q9HCN2 124 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 H3BRN7 92 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 LECT2O14960 151 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 ZNF581Q9P0T4 197 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 RSPO4Q2I0M5 234 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-202ENST00000344113 LINC00208Q96KT6 92 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-72A0A0B4J1Y9 119 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV3D-15A0A087WSY6 115 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 IGLV2-8P01709 118 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 FGF23Q9GZV9 251 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-202ENST00000344113 Q6ZRM9 215 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 FAM167A-AS1Q96KT0 104 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV3D-11A0A0A0MRZ8 115 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 CRIP2P52943 208 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-202ENST00000344113 C17orf77Q96MU5 243 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 SBF2Q86WG5 1849 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 C4orf51C9J302 202 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV4-1P06312 121 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 MSMBP08118 114 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 HILS1P60008 231 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 SOSTDC1Q6X4U4 206 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 EXOC3-AS1Q8N2X6 119 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 NSUN5P1Q3KNT7 163 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 GREB1LQ9C091 1923 aaPredicted RBP2.87□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV5-51A0A0C4DH38 117 aa2.87□□□□□ -1.95
SYNE2-202ENST00000344113 NDUFA4L2Q9NRX3 87 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 NYNRINQ9P2P1 1898 aaKnown RBP2.86□□□□□ -1.95
SYNE2-202ENST00000344113 ALPK3Q96L96 1907 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 ADM5C9JUS6 153 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 LYPD5Q6UWN5 251 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 VMO1Q7Z5L0 202 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 BSPH1Q075Z2 132 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 ECM29Q5VYK3 1845 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 LINC00311Q8N616 119 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 C7orf69Q9H7B7 122 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 EFNA4P52798 201 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 FAM110DQ8TAY7 271 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-202ENST00000344113 EPG5Q9HCE0 2579 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 CT62P0C5K7 136 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 B9D2Q9BPU9 175 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 CYYR1Q96J86 154 aa2.86□□□□□ -1.95
SYNE2-202ENST00000344113 KLK5Q9Y337 293 aaPredicted RBP2.86□□□□□ -1.95
SYNE2-202ENST00000344113 SPINK2P20155 84 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 PRRC2CQ9Y520 2896 aaKnown RBP2.85□□□□□ -1.95
SYNE2-202ENST00000344113 ANK1P16157 1881 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 CTSGP08311 255 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 ZFAND3Q9H8U3 227 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 PSPHP1O15172 72 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 COX6B1P14854 86 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 NRXN2Q9P2S2 1712 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 SPRR3Q9UBC9 169 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV1D-16P01601 117 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-13P01766 116 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 NCR3O14931 201 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 DCANP1Q8TF63 244 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 ZNF831Q5JPB2 1677 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 SMCPP49901 116 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-202ENST00000344113 PARP14Q460N5 1801 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 LY6LH3BQJ8 138 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 ZNF73O43830 326 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-202ENST00000344113 ODF3L1Q8IXM7 274 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 DEFB104AQ8WTQ1 72 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 CAMK2N2Q96S95 79 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 BTAF1O14981 1849 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 PRB1P04280 392 aa2.85□□□□□ -1.95
SYNE2-202ENST00000344113 COL4A4P53420 1690 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-202ENST00000344113 Q8N7P7 452 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV1-18A0A0C4DH31 117 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 FSTL3O95633 263 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 AMELXQ99217 191 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV1OR15-9A0A0B4J2B8 117 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 IGF1P05019 195 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 COL16A1Q07092 1604 aaPredicted RBP2.84□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV1-8P0DP01 117 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 ZNF295-AS1Q8N0V1 137 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV1-8A0A0C4DH67 115 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-20A0A0C4DH32 117 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 TMEM263Q8WUH6 116 aaKnown RBP2.84□□□□□ -1.95
SYNE2-202ENST00000344113 SRCAPQ6ZRS2 3230 aa2.84□□□□□ -1.95
SYNE2-202ENST00000344113 SETD2Q9BYW2 2564 aaPredicted RBP2.84□□□□□ -1.95
SYNE2-202ENST00000344113 USP9XQ93008 2570 aaPredicted RBP2.84□□□□□ -1.95
SYNE2-202ENST00000344113 DSCR9P59020 149 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 TRBV6-8A0A0A6YYG3 113 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 H3BUX3 64 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 USP9YO00507 2555 aaPredicted RBP2.84□□□□□ -1.96
SYNE2-202ENST00000344113 Q9HAA7 133 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 STRCQ7RTU9 1775 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 FOXS1O43638 330 aa2.84□□□□□ -1.96
SYNE2-202ENST00000344113 FAM168AQ92567 244 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV3-15P01624 115 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 COX7BP24311 80 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 IGKV1D-8A0A087WSZ0 117 aa2.83□□□□□ -1.96
SYNE2-202ENST00000344113 DKK1O94907 266 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms