RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HERVK_113P63121 156 aa5.46□□□□□ -1.54
VCAN-202ENST00000342785 SS18Q15532 418 aa5.46□□□□□ -1.54
VCAN-202ENST00000342785 ZFAND2AQ8N6M9 145 aa5.46□□□□□ -1.54
VCAN-202ENST00000342785 C20orf203Q8NBC4 194 aa5.46□□□□□ -1.54
VCAN-202ENST00000342785 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.54
VCAN-202ENST00000342785 CDSNQ15517 529 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 H3BMM0 161 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 UBE2WQ96B02 151 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 Q9H8V8 135 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 NOP10Q9NPE3 64 aaKnown RBP5.45□□□□□ -1.54
VCAN-202ENST00000342785 C11orf21Q9P2W6 132 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 CCL24O00175 119 aa5.45□□□□□ -1.54
VCAN-202ENST00000342785 OPRPNQ99935 248 aaPredicted RBP5.45□□□□□ -1.54
VCAN-202ENST00000342785 TMEM89A2RUT3 159 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 CEP192Q8TEP8 1941 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 IGHG4P01861 327 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 DEFB113Q30KQ7 82 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 URB1-AS1Q96HZ7 61 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 NXPH4O95158 308 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 RNF185Q96GF1 192 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 Q8N976 141 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 C20orf173Q96LM9 149 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 GHRHP01286 108 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 CARD19Q96LW7 228 aa5.44□□□□□ -1.54
VCAN-202ENST00000342785 U3KQK5 164 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 ATG2AQ2TAZ0 1938 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 GAGE2AQ6NT46 116 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 CPAMD8Q8IZJ3 1885 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 GAS8-AS1O95177 125 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 F5H768 121 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 K7EQG2 157 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 RNF152Q8N8N0 203 aa5.43□□□□□ -1.54
VCAN-202ENST00000342785 Q71RC1 249 aaPredicted RBP5.43□□□□□ -1.54
VCAN-202ENST00000342785 INAFM2P0DMQ5 153 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 OVOL2Q9BRP0 275 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 MRPS12O15235 138 aaKnown RBP5.42□□□□□ -1.54
VCAN-202ENST00000342785 IFITM1P13164 125 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 DAD1P61803 113 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 A0A096LPF7 62 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 TEN1Q86WV5 123 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 DNAJC30Q96LL9 226 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 TM2D2Q9BX73 214 aa5.42□□□□□ -1.54
VCAN-202ENST00000342785 CEMP1Q6PRD7 247 aaPredicted RBP5.41□□□□□ -1.54
VCAN-202ENST00000342785 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 FLNBO75369 2602 aaKnown RBP5.41□□□□□ -1.54
VCAN-202ENST00000342785 PRSS47A8MTI9 375 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 C10orf99Q6UWK7 81 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 MAPKAPK5-AS1Q8N8E1 139 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 C5orf38Q86SI9 138 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 NEXN-AS1Q8NBZ9 246 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 C2orf91Q6ZV80 131 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 LINC01620Q4KN68 170 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 PRR9Q5T870 116 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 DAND5Q8N907 189 aa5.41□□□□□ -1.54
VCAN-202ENST00000342785 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 ANKRD29Q8N6D5 301 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 DPH3Q96FX2 82 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 A0A1W2PPR1 153 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 J3QKU1 62 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 PTH2Q96A98 100 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 CLPSL1A2RUU4 121 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 HIST1H4AP62805 103 aaKnown RBP5.4□□□□□ -1.54
VCAN-202ENST00000342785 SLC25A29Q8N8R3 303 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 CNFNQ9BYD5 112 aa5.4□□□□□ -1.54
VCAN-202ENST00000342785 VSIG2Q96IQ7 327 aa5.4□□□□□ -1.55
VCAN-202ENST00000342785 TRBV7-3A0A075B6L6 115 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 P0DMU3 169 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 FAM231AP0DMU4 169 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 FAM231CP0DMU5 169 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 NRACQ8N912 160 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 A0A0C4DFX4 3053 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 ANGP03950 147 aaKnown RBP5.39□□□□□ -1.55
VCAN-202ENST00000342785 XCL1P47992 114 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 C15orf53Q8NAA6 179 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 Q6ZQT7 251 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 NDUFA11Q86Y39 141 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
VCAN-202ENST00000342785 PIFOQ8TCI5 191 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 RNASE3P12724 160 aaKnown RBP5.39□□□□□ -1.55
VCAN-202ENST00000342785 Q6ZS46 218 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 ODF3Q96PU9 254 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 PRORYQ9H606 182 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 C5orf42Q9H799 3197 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 K7EQD1 137 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
VCAN-202ENST00000342785 FOXI1Q12951 378 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 A0A0J9YY99 117 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 SOCS3O14543 225 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 MAP6D1Q9H9H5 199 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 TRAV25A0A0B4J276 109 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 G3V4G9 280 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 M0QY20 66 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 HERV-K104P63124 156 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 DAZ2Q13117 558 aaKnown RBP5.38□□□□□ -1.55
VCAN-202ENST00000342785 DAZ4Q86SG3 579 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms