RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CCDC140Q96MF4 163 aa11.42□□□□□ -0.58
UBE3B-202ENST00000342494 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
UBE3B-202ENST00000342494 LINC01548A6NM66 108 aa11.42□□□□□ -0.58
UBE3B-202ENST00000342494 LYPD6BQ8NI32 183 aa11.42□□□□□ -0.58
UBE3B-202ENST00000342494 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
UBE3B-202ENST00000342494 DIRC1Q969H9 104 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 A4D1N5 150 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 MYO18BQ8IUG5 2567 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 NREPQ16612 68 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
UBE3B-202ENST00000342494 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 H3BQ85 93 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 CHKB-CPT1BH3BT56 60 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 HIGD2BQ4VC39 106 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 LYPD6Q86Y78 171 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 TOMM6Q96B49 74 aa11.4□□□□□ -0.58
UBE3B-202ENST00000342494 DENND4CQ5VZ89 1909 aa11.4□□□□□ -0.59
UBE3B-202ENST00000342494 CTRLP40313 264 aa11.4□□□□□ -0.59
UBE3B-202ENST00000342494 Q6ZTI0 123 aa11.4□□□□□ -0.59
UBE3B-202ENST00000342494 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 IGF1P05019 195 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 SMIM9A6NGZ8 99 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 LYRM9A8MSI8 78 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 LY6G6DO95868 133 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 CITED1Q99966 193 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 PRO3102Q9H379 93 aa11.39□□□□□ -0.59
UBE3B-202ENST00000342494 LGALS9O00182 355 aa11.38□□□□□ -0.59
UBE3B-202ENST00000342494 ADAMTS9Q9P2N4 1935 aa11.38□□□□□ -0.59
UBE3B-202ENST00000342494 Q6ZSV7 163 aa11.38□□□□□ -0.59
UBE3B-202ENST00000342494 KIF26AQ9ULI4 1882 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-202ENST00000342494 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
UBE3B-202ENST00000342494 FAM110AQ9BQ89 295 aa11.38□□□□□ -0.59
UBE3B-202ENST00000342494 MIR7-3HGQ8N6C7 128 aa11.38□□□□□ -0.59
UBE3B-202ENST00000342494 LINC00173Q6ZV60 143 aa11.37□□□□□ -0.59
UBE3B-202ENST00000342494 CRYGDP07320 174 aa11.37□□□□□ -0.59
UBE3B-202ENST00000342494 C20orf203Q8NBC4 194 aa11.37□□□□□ -0.59
UBE3B-202ENST00000342494 LINC00269Q8N2A0 174 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 MP68P56378 58 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 REG3AQ06141 175 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 SORL1Q92673 2214 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 LRCOL1A6NCL2 159 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 LECT2O14960 151 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
UBE3B-202ENST00000342494 CHD3Q12873 2000 aaKnown RBP11.35□□□□□ -0.59
UBE3B-202ENST00000342494 A0A1B0GX51 115 aa11.35□□□□□ -0.59
UBE3B-202ENST00000342494 C22orf34Q6ZV56 151 aa11.35□□□□□ -0.59
UBE3B-202ENST00000342494 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
UBE3B-202ENST00000342494 ACYP1P07311 99 aa11.35□□□□□ -0.59
UBE3B-202ENST00000342494 HIGD2AQ9BW72 106 aa11.34□□□□□ -0.59
UBE3B-202ENST00000342494 K7EQG2 157 aa11.34□□□□□ -0.59
UBE3B-202ENST00000342494 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
UBE3B-202ENST00000342494 HIVEP3Q5T1R4 2406 aa11.34□□□□□ -0.59
UBE3B-202ENST00000342494 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
UBE3B-202ENST00000342494 RBM3P98179 157 aaKnown RBP11.34□□□□□ -0.59
UBE3B-202ENST00000342494 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
UBE3B-202ENST00000342494 CEMP1Q6PRD7 247 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-202ENST00000342494 Q6ZUT4 128 aa11.33□□□□□ -0.6
UBE3B-202ENST00000342494 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
UBE3B-202ENST00000342494 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
UBE3B-202ENST00000342494 P0DMU3 169 aa11.33□□□□□ -0.6
UBE3B-202ENST00000342494 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
UBE3B-202ENST00000342494 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
UBE3B-202ENST00000342494 IGKV1D-37A0A075B6S9 117 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 E9PLD3 99 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 H0Y9J4 135 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 COX7BP24311 80 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 FSTL3O95633 263 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 MIFP14174 115 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 UFSP1Q6NVU6 142 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
UBE3B-202ENST00000342494 JMJD7-PLA2G4BH0Y9G9 81 aa11.31□□□□□ -0.6
UBE3B-202ENST00000342494 NAV2Q8IVL1 2488 aa11.31□□□□□ -0.6
UBE3B-202ENST00000342494 A0A087WZ39 114 aa11.31□□□□□ -0.6
UBE3B-202ENST00000342494 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
UBE3B-202ENST00000342494 NPSP0C0P6 89 aa11.3□□□□□ -0.6
UBE3B-202ENST00000342494 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
UBE3B-202ENST00000342494 PIEZO1Q92508 2521 aa11.3□□□□□ -0.6
UBE3B-202ENST00000342494 CHCHD10Q8WYQ3 142 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-202ENST00000342494 TMEM258P61165 79 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 LINC01620Q4KN68 170 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 C11orf71Q6IPW1 123 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 C2orf16Q68DN1 1984 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-202ENST00000342494 C14orf132Q9NPU4 83 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 FREM1Q5H8C1 2179 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 IGKV3D-7A0A0C4DH55 119 aa11.29□□□□□ -0.6
UBE3B-202ENST00000342494 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 NUPR1O60356 82 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 C5orf47Q569G3 176 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 WFDC9Q8NEX5 89 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 TRAV10A0A0B4J240 114 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-202ENST00000342494 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
UBE3B-202ENST00000342494 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms