RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 MUC21A0A140T8X8 626 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 F8W036 122 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 SNAI2O43623 268 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 SPANXN1Q5VSR9 72 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 URGCP-MRPS24S4R325 110 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 IGLV5-52A0A0A0MRZ9 124 aa13.44□□□□□ -0.26
SYNE2-201ENST00000341472 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
SYNE2-201ENST00000341472 SSTP61278 116 aa13.44□□□□□ -0.26
SYNE2-201ENST00000341472 OCC1Q8TAD7 63 aa13.44□□□□□ -0.26
SYNE2-201ENST00000341472 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-201ENST00000341472 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
SYNE2-201ENST00000341472 IGLV2-8P01709 118 aa13.43□□□□□ -0.26
SYNE2-201ENST00000341472 XGP55808 180 aa13.43□□□□□ -0.26
SYNE2-201ENST00000341472 UBE2D3P61077 147 aa13.43□□□□□ -0.26
SYNE2-201ENST00000341472 UBE2D2P62837 147 aa13.43□□□□□ -0.26
SYNE2-201ENST00000341472 NIT1Q86X76 327 aa13.43□□□□□ -0.26
SYNE2-201ENST00000341472 Q8N814 137 aa13.43□□□□□ -0.26
SYNE2-201ENST00000341472 PNRC1Q12796 327 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-201ENST00000341472 ZNF56Q15929 161 aa13.42□□□□□ -0.26
SYNE2-201ENST00000341472 OR10G8Q8NGN5 311 aa13.42□□□□□ -0.26
SYNE2-201ENST00000341472 F5H697 171 aa13.41□□□□□ -0.26
SYNE2-201ENST00000341472 C10orf91Q5T1B1 145 aa13.41□□□□□ -0.26
SYNE2-201ENST00000341472 KCNIP4Q6PIL6 250 aa13.41□□□□□ -0.26
SYNE2-201ENST00000341472 LINC01551Q86U37 167 aa13.41□□□□□ -0.26
SYNE2-201ENST00000341472 A0A087WX48 190 aa13.4□□□□□ -0.26
SYNE2-201ENST00000341472 SMIM17P0DL12 118 aa13.4□□□□□ -0.26
SYNE2-201ENST00000341472 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
SYNE2-201ENST00000341472 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
SYNE2-201ENST00000341472 CARHSP1Q9Y2V2 147 aaKnown RBP13.4□□□□□ -0.26
SYNE2-201ENST00000341472 COX11Q9Y6N1 276 aa13.4□□□□□ -0.26
SYNE2-201ENST00000341472 TMEM262E9PQX1 116 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 ADCYAP1P18509 176 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
SYNE2-201ENST00000341472 ELOBQ15370 118 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-201ENST00000341472 NEXN-AS1Q8NBZ9 246 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 RMI2Q96E14 147 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 KLK12Q9UKR0 248 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 FAT1Q14517 4588 aa13.39□□□□□ -0.27
SYNE2-201ENST00000341472 EPM2AB3EWF7 344 aa13.38□□□□□ -0.27
SYNE2-201ENST00000341472 GZMBP10144 247 aa13.38□□□□□ -0.27
SYNE2-201ENST00000341472 ADIRFQ15847 76 aa13.38□□□□□ -0.27
SYNE2-201ENST00000341472 CHCHD7Q9BUK0 85 aa13.38□□□□□ -0.27
SYNE2-201ENST00000341472 TPPP3Q9BW30 176 aa13.38□□□□□ -0.27
SYNE2-201ENST00000341472 TRBV6-8A0A0A6YYG3 113 aa13.37□□□□□ -0.27
SYNE2-201ENST00000341472 C19orf71A6NCJ1 209 aa13.37□□□□□ -0.27
SYNE2-201ENST00000341472 K7EN84 100 aa13.37□□□□□ -0.27
SYNE2-201ENST00000341472 FER1L6-AS1Q8NA97 138 aa13.37□□□□□ -0.27
SYNE2-201ENST00000341472 KIF25-AS1Q9Y6Z4 181 aa13.37□□□□□ -0.27
SYNE2-201ENST00000341472 XKRY2A2RUG3 117 aa13.36□□□□□ -0.27
SYNE2-201ENST00000341472 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
SYNE2-201ENST00000341472 ISOC2Q96AB3 205 aa13.36□□□□□ -0.27
SYNE2-201ENST00000341472 UBE2WQ96B02 151 aa13.36□□□□□ -0.27
SYNE2-201ENST00000341472 AP1S3Q96PC3 154 aa13.36□□□□□ -0.27
SYNE2-201ENST00000341472 LECT2O14960 151 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 P01737 135 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 IGLC6P0CF74 106 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 CACNG7P62955 275 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 WFDC2Q14508 124 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 BAALCQ8WXS3 180 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
SYNE2-201ENST00000341472 IGKV2D-24A0A075B6R9 120 aa13.34□□□□□ -0.27
SYNE2-201ENST00000341472 F2Z2F3 143 aa13.34□□□□□ -0.27
SYNE2-201ENST00000341472 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
SYNE2-201ENST00000341472 NUDT11Q96G61 164 aa13.34□□□□□ -0.27
SYNE2-201ENST00000341472 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
SYNE2-201ENST00000341472 TMEM70Q9BUB7 260 aa13.34□□□□□ -0.27
SYNE2-201ENST00000341472 APOC3P02656 99 aa13.33□□□□□ -0.28
SYNE2-201ENST00000341472 TMEM97Q5BJF2 176 aa13.33□□□□□ -0.28
SYNE2-201ENST00000341472 SVBPQ8N300 66 aa13.33□□□□□ -0.28
SYNE2-201ENST00000341472 PPP1R2P9O14990 202 aa13.32□□□□□ -0.28
SYNE2-201ENST00000341472 GATCO43716 136 aaKnown RBP13.32□□□□□ -0.28
SYNE2-201ENST00000341472 MT-ND4LP03901 98 aa13.32□□□□□ -0.28
SYNE2-201ENST00000341472 Q0VG73 95 aa13.32□□□□□ -0.28
SYNE2-201ENST00000341472 FRZBQ92765 325 aa13.32□□□□□ -0.28
SYNE2-201ENST00000341472 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
SYNE2-201ENST00000341472 SNAPINO95295 136 aa13.31□□□□□ -0.28
SYNE2-201ENST00000341472 MGPP08493 103 aa13.31□□□□□ -0.28
SYNE2-201ENST00000341472 PKIAP61925 76 aa13.31□□□□□ -0.28
SYNE2-201ENST00000341472 Q8N976 141 aa13.31□□□□□ -0.28
SYNE2-201ENST00000341472 ANAPC16Q96DE5 110 aa13.31□□□□□ -0.28
SYNE2-201ENST00000341472 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
SYNE2-201ENST00000341472 DNAH8Q96JB1 4490 aa13.31□□□□□ -0.28
SYNE2-201ENST00000341472 H7C1H1 209 aa13.3□□□□□ -0.28
SYNE2-201ENST00000341472 M0QY20 66 aa13.3□□□□□ -0.28
SYNE2-201ENST00000341472 SMR3BP02814 79 aaPredicted RBP13.3□□□□□ -0.28
SYNE2-201ENST00000341472 LYZL1Q6UWQ5 148 aa13.3□□□□□ -0.28
SYNE2-201ENST00000341472 CLRN3Q8NCR9 226 aa13.3□□□□□ -0.28
SYNE2-201ENST00000341472 RPP21Q9H633 154 aaKnown RBP13.3□□□□□ -0.28
SYNE2-201ENST00000341472 RHEBQ15382 184 aa13.29□□□□□ -0.28
SYNE2-201ENST00000341472 CT83Q5H943 113 aa13.29□□□□□ -0.28
SYNE2-201ENST00000341472 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
SYNE2-201ENST00000341472 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
SYNE2-201ENST00000341472 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-201ENST00000341472 A8MWL6 223 aa13.28□□□□□ -0.28
SYNE2-201ENST00000341472 TRGC1P0CF51 173 aa13.28□□□□□ -0.28
SYNE2-201ENST00000341472 S100A1P23297 94 aa13.28□□□□□ -0.28
SYNE2-201ENST00000341472 HAMPP81172 84 aa13.28□□□□□ -0.28
SYNE2-201ENST00000341472 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms