RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 DEFB108BQ8NET1 73 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 TRAV21A0A0B4J279 112 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 A8MZ25 164 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 H7BZZ5 65 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 DSCAMO60469 2012 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 LYPD5Q6UWN5 251 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 C17orf82Q86X59 251 aaPredicted RBP8.97□□□□□ -0.97
TPX2-202ENST00000340513 SPTBN4Q9H254 2564 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 LAMA5O15230 3695 aa8.97□□□□□ -0.97
TPX2-202ENST00000340513 ENHOQ6UWT2 76 aa8.96□□□□□ -0.97
TPX2-202ENST00000340513 ZNF580Q9UK33 172 aa8.96□□□□□ -0.97
TPX2-202ENST00000340513 AKAP6Q13023 2319 aa8.96□□□□□ -0.98
TPX2-202ENST00000340513 PCNX1Q96RV3 2341 aa8.96□□□□□ -0.98
TPX2-202ENST00000340513 TRBV12-3P01733 135 aa8.96□□□□□ -0.98
TPX2-202ENST00000340513 GVINP1Q7Z2Y8 2422 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 ZNF292O60281 2723 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 IGHV3OR16-8A0A075B7F1 116 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 A0A0J9YXY3 114 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 F5H697 171 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 Q9UF83 564 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 RPL28P46779 137 aaKnown RBP8.95□□□□□ -0.98
TPX2-202ENST00000340513 OPRPNQ99935 248 aaPredicted RBP8.95□□□□□ -0.98
TPX2-202ENST00000340513 PIEZO1Q92508 2521 aa8.95□□□□□ -0.98
TPX2-202ENST00000340513 IGHV3-72A0A0B4J1Y9 119 aa8.94□□□□□ -0.98
TPX2-202ENST00000340513 Q6JHZ5 121 aa8.94□□□□□ -0.98
TPX2-202ENST00000340513 BUB3O43684 328 aa8.94□□□□□ -0.98
TPX2-202ENST00000340513 PCOLCEQ15113 449 aa8.94□□□□□ -0.98
TPX2-202ENST00000340513 IMMP1LQ96LU5 166 aa8.94□□□□□ -0.98
TPX2-202ENST00000340513 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
TPX2-202ENST00000340513 PF4P02776 101 aa8.93□□□□□ -0.98
TPX2-202ENST00000340513 NFAM1Q8NET5 270 aaPredicted RBP8.93□□□□□ -0.98
TPX2-202ENST00000340513 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
TPX2-202ENST00000340513 LINC01546A6NGU7 62 aa8.93□□□□□ -0.98
TPX2-202ENST00000340513 THAP8Q8NA92 274 aa8.93□□□□□ -0.98
TPX2-202ENST00000340513 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
TPX2-202ENST00000340513 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
TPX2-202ENST00000340513 LEPROTO15243 131 aa8.92□□□□□ -0.98
TPX2-202ENST00000340513 APOC4P55056 127 aa8.92□□□□□ -0.98
TPX2-202ENST00000340513 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
TPX2-202ENST00000340513 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
TPX2-202ENST00000340513 GRNP28799 593 aaKnown RBP8.92□□□□□ -0.98
TPX2-202ENST00000340513 LINC01600Q96MT4 127 aa8.92□□□□□ -0.98
TPX2-202ENST00000340513 COL4A2P08572 1712 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
TPX2-202ENST00000340513 RFPL3SP0C7P2 107 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 MRPS36P82909 103 aaKnown RBP8.91□□□□□ -0.98
TPX2-202ENST00000340513 CNOT1A5YKK6 2376 aaKnown RBP8.91□□□□□ -0.98
TPX2-202ENST00000340513 PSPHP1O15172 72 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 OTOGLQ3ZCN5 2332 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 IGKV3D-20A0A0C4DH25 116 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 IGHV3-35A0A0C4DH35 117 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 PRSS33Q8NF86 280 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
TPX2-202ENST00000340513 PKDREJQ9NTG1 2253 aa8.9□□□□□ -0.98
TPX2-202ENST00000340513 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
TPX2-202ENST00000340513 RPL27AP46776 148 aaKnown RBP8.9□□□□□ -0.98
TPX2-202ENST00000340513 RNF7Q9UBF6 113 aa8.9□□□□□ -0.98
TPX2-202ENST00000340513 IGLV3-32A0A0A0MS00 114 aa8.9□□□□□ -0.99
TPX2-202ENST00000340513 FAM229BQ4G0N7 80 aa8.9□□□□□ -0.99
TPX2-202ENST00000340513 TMEM61Q8N0U2 210 aa8.9□□□□□ -0.99
TPX2-202ENST00000340513 CACNA1EQ15878 2313 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 SOCS3O14543 225 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 COX7A2LO14548 114 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 PRB2P02812 416 aaPredicted RBP8.89□□□□□ -0.99
TPX2-202ENST00000340513 VSIG2Q96IQ7 327 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 PLAC8L1A1L4L8 177 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 BUB1B-PAK6H3BSN5 160 aa8.89□□□□□ -0.99
TPX2-202ENST00000340513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.89□□□□□ -0.992e-8■■■■□ 22.5
TPX2-202ENST00000340513 SPTY2D1-AS1A0A0U1RR47 76 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 AMELXQ99217 191 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 ABCA4P78363 2273 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 TRBV6-1A0A0K0K1D8 114 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 CFHR1Q03591 330 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 PHLDA3Q9Y5J5 127 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.88□□□□□ -0.99
TPX2-202ENST00000340513 TMEM14CQ9P0S9 112 aa8.88□□□□□ -0.99
TPX2-202ENST00000340513 HOXB4P17483 251 aaPredicted RBP8.87□□□□□ -0.99
TPX2-202ENST00000340513 C6orf223Q8N319 242 aa8.87□□□□□ -0.99
TPX2-202ENST00000340513 NCR3O14931 201 aa8.87□□□□□ -0.99
TPX2-202ENST00000340513 CLEC19AQ6UXS0 136 aa8.87□□□□□ -0.99
TPX2-202ENST00000340513 UBE2E2Q96LR5 201 aa8.87□□□□□ -0.99
TPX2-202ENST00000340513 SPTA1P02549 2419 aa8.87□□□□□ -0.99
TPX2-202ENST00000340513 TMEM190Q8WZ59 177 aa8.87□□□□□ -0.99
TPX2-202ENST00000340513 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 BLCAPP62952 87 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 DGAT2L7PQ6IED9 249 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 GGNQ86UU5 652 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 TSHBP01222 138 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 CFHR3Q02985 330 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
TPX2-202ENST00000340513 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
TPX2-202ENST00000340513 LHBP01229 141 aa8.85□□□□□ -0.99
TPX2-202ENST00000340513 CXXC4Q9H2H0 198 aa8.85□□□□□ -0.99
TPX2-202ENST00000340513 LAMTOR3Q9UHA4 124 aa8.85□□□□□ -0.99
TPX2-202ENST00000340513 IGHV3OR16-13A0A075B7E8 117 aa8.85□□□□□ -0.99
TPX2-202ENST00000340513 IGHV3-74A0A0B4J1X5 117 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms