RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 IGHG2P01859 326 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 P0DMU3 169 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 ZNF876PQ49A33 203 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 CEMP1Q6PRD7 247 aaPredicted RBP10.75□□□□□ -0.69
CPSF7-201ENST00000340437 SPXQ9BT56 116 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 ZNF580Q9UK33 172 aa10.75□□□□□ -0.69
CPSF7-201ENST00000340437 IGLV4-69A0A075B6H9 119 aa10.74□□□□□ -0.69
CPSF7-201ENST00000340437 PPP1R17O96001 155 aa10.74□□□□□ -0.69
CPSF7-201ENST00000340437 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
CPSF7-201ENST00000340437 Q5PR19 223 aa10.74□□□□□ -0.69
CPSF7-201ENST00000340437 FBN2P35556 2912 aa10.74□□□□□ -0.69
CPSF7-201ENST00000340437 A0A0J9YY99 117 aa10.73□□□□□ -0.69
CPSF7-201ENST00000340437 J3QQQ9 107 aa10.73□□□□□ -0.69
CPSF7-201ENST00000340437 LINC00315P59091 139 aa10.73□□□□□ -0.69
CPSF7-201ENST00000340437 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
CPSF7-201ENST00000340437 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
CPSF7-201ENST00000340437 PROK1P58294 105 aa10.73□□□□□ -0.69
CPSF7-201ENST00000340437 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
CPSF7-201ENST00000340437 IGIPA6NJ69 53 aa10.72□□□□□ -0.69
CPSF7-201ENST00000340437 TCL1BO95988 128 aa10.72□□□□□ -0.69
CPSF7-201ENST00000340437 KIF25-AS1Q9Y6Z4 181 aa10.72□□□□□ -0.69
CPSF7-201ENST00000340437 POLR2KP53803 58 aaKnown RBP10.72□□□□□ -0.69
CPSF7-201ENST00000340437 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
CPSF7-201ENST00000340437 A6NDX4 124 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-201ENST00000340437 C19orf54Q5BKX5 351 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 NFE4Q86UQ8 179 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 PRO0461Q9UI25 63 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 MSMBP08118 114 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 FOXI1Q12951 378 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 VCX2Q9H322 139 aa10.71□□□□□ -0.69
CPSF7-201ENST00000340437 A4D1N5 150 aa10.71□□□□□ -0.7
CPSF7-201ENST00000340437 CFC1BP0CG36 223 aa10.71□□□□□ -0.7
CPSF7-201ENST00000340437 CFC1P0CG37 223 aa10.71□□□□□ -0.7
CPSF7-201ENST00000340437 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.7
CPSF7-201ENST00000340437 COX6B1P14854 86 aa10.7□□□□□ -0.7
CPSF7-201ENST00000340437 DCANP1Q8TF63 244 aa10.7□□□□□ -0.7
CPSF7-201ENST00000340437 HELZ2Q9BYK8 2649 aaKnown RBP10.7□□□□□ -0.7
CPSF7-201ENST00000340437 DEFB112Q30KQ8 113 aa10.7□□□□□ -0.7
CPSF7-201ENST00000340437 KLLNB2CW77 178 aa10.7□□□□□ -0.7
CPSF7-201ENST00000340437 IGHV3-38A0A0C4DH36 116 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 A8MZ25 164 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 USP24Q9UPU5 2620 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 C9JAW5 83 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 PAPPA-AS1Q5QFB9 102 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
CPSF7-201ENST00000340437 SPINK8P0C7L1 97 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 C1QTNF4Q9BXJ3 329 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 Q9UF83 564 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 CKS1BP61024 79 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 MUSTN1Q8IVN3 82 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 CD28P10747 220 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 TMEM141Q96I45 108 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 PRO1854Q9UHT4 67 aa10.68□□□□□ -0.7
CPSF7-201ENST00000340437 M0QY20 66 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 CIDEAO60543 219 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 UBE2D1P51668 147 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 A8MWV9 139 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
CPSF7-201ENST00000340437 A0A0J9YX75 114 aa10.66□□□□□ -0.7
CPSF7-201ENST00000340437 MED14OSP0DP75 135 aa10.66□□□□□ -0.7
CPSF7-201ENST00000340437 CRIP2P52943 208 aaPredicted RBP10.66□□□□□ -0.7
CPSF7-201ENST00000340437 IGHV4OR15-8A0A075B7B6 117 aa10.66□□□□□ -0.7
CPSF7-201ENST00000340437 A0A087WW49 117 aa10.66□□□□□ -0.7
CPSF7-201ENST00000340437 DEFB131AP59861 70 aa10.66□□□□□ -0.7
CPSF7-201ENST00000340437 NBEAL2Q6ZNJ1 2754 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 IGLV1-40P01703 118 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 LYRM7Q5U5X0 104 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 ATP6V0BQ99437 205 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
CPSF7-201ENST00000340437 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 ANKRD29Q8N6D5 301 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 TNFRSF18Q9Y5U5 241 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-201ENST00000340437 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-201ENST00000340437 I3L3M4 83 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 DAND5Q8N907 189 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 TRBV27A0A0K0K1C4 114 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 A0A1B0GV72 72 aa10.64□□□□□ -0.71
CPSF7-201ENST00000340437 Q6ZSV7 163 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 CARD19Q96LW7 228 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 IGKV3OR2-268A0A0C4DH90 116 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 H3BUA1 57 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms