RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
RET-201ENST00000340058 IGHG4P01861 327 aa11.13□□□□□ -0.63
RET-201ENST00000340058 MRAPQ8TCY5 172 aa11.13□□□□□ -0.63
RET-201ENST00000340058 ZNF48Q96MX3 618 aaPredicted RBP11.13□□□□□ -0.63
RET-201ENST00000340058 J3QQQ9 107 aa11.13□□□□□ -0.63
RET-201ENST00000340058 ZNF493Q6ZR52 646 aa11.13□□□□□ -0.63
RET-201ENST00000340058 A0A0J9YX75 114 aa11.13□□□□□ -0.63
RET-201ENST00000340058 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
RET-201ENST00000340058 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
RET-201ENST00000340058 GAS8-AS1O95177 125 aa11.12□□□□□ -0.63
RET-201ENST00000340058 IGLV2-11P01706 119 aa11.12□□□□□ -0.63
RET-201ENST00000340058 MYCNOSP40205 109 aa11.12□□□□□ -0.63
RET-201ENST00000340058 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
RET-201ENST00000340058 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
RET-201ENST00000340058 ZFP2Q6ZN57 461 aa11.12□□□□□ -0.63
RET-201ENST00000340058 Q8N6K4 173 aa11.12□□□□□ -0.63
RET-201ENST00000340058 COL5A1P20908 1838 aaPredicted RBP11.12□□□□□ -0.63
RET-201ENST00000340058 TET2Q6N021 2002 aaPredicted RBP11.12□□□□□ -0.63
RET-201ENST00000340058 C9JAW5 83 aa11.11□□□□□ -0.63
RET-201ENST00000340058 K7EMT4 169 aa11.11□□□□□ -0.63
RET-201ENST00000340058 H3BMG7 143 aa11.11□□□□□ -0.63
RET-201ENST00000340058 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
RET-201ENST00000340058 COL4A2P08572 1712 aa11.11□□□□□ -0.63
RET-201ENST00000340058 AGRNO00468 2067 aa11.11□□□□□ -0.63
RET-201ENST00000340058 C5orf38Q86SI9 138 aa11.11□□□□□ -0.63
RET-201ENST00000340058 CCL25O15444 150 aa11.1□□□□□ -0.63
RET-201ENST00000340058 C11orf21Q9P2W6 132 aa11.1□□□□□ -0.63
RET-201ENST00000340058 AKAP13Q12802 2813 aa11.1□□□□□ -0.63
RET-201ENST00000340058 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
RET-201ENST00000340058 TMEM86BQ8N661 226 aa11.1□□□□□ -0.63
RET-201ENST00000340058 GTSF1LQ9H1H1 148 aa11.1□□□□□ -0.63
RET-201ENST00000340058 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
RET-201ENST00000340058 PCSK5Q92824 1860 aa11.09□□□□□ -0.63
RET-201ENST00000340058 IGLV10-54A0A075B6I4 117 aa11.09□□□□□ -0.63
RET-201ENST00000340058 FSTL3O95633 263 aa11.09□□□□□ -0.63
RET-201ENST00000340058 XCL1P47992 114 aa11.09□□□□□ -0.63
RET-201ENST00000340058 K7EP13 123 aa11.09□□□□□ -0.63
RET-201ENST00000340058 ANGP03950 147 aaKnown RBP11.08□□□□□ -0.64
RET-201ENST00000340058 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
RET-201ENST00000340058 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
RET-201ENST00000340058 PRR9Q5T870 116 aa11.08□□□□□ -0.64
RET-201ENST00000340058 DAND5Q8N907 189 aa11.08□□□□□ -0.64
RET-201ENST00000340058 DEFB135Q30KP9 77 aa11.08□□□□□ -0.64
RET-201ENST00000340058 PIFOQ8TCI5 191 aa11.08□□□□□ -0.64
RET-201ENST00000340058 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
RET-201ENST00000340058 ZFAND2AQ8N6M9 145 aa11.07□□□□□ -0.64
RET-201ENST00000340058 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
RET-201ENST00000340058 C9orf118A6NHY6 69 aa11.07□□□□□ -0.64
RET-201ENST00000340058 FXYD2P54710 66 aa11.07□□□□□ -0.64
RET-201ENST00000340058 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
RET-201ENST00000340058 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
RET-201ENST00000340058 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
RET-201ENST00000340058 TSPAN13O95857 204 aa11.07□□□□□ -0.64
RET-201ENST00000340058 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
RET-201ENST00000340058 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
RET-201ENST00000340058 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
RET-201ENST00000340058 SMR3AQ99954 134 aa11.07□□□□□ -0.64
RET-201ENST00000340058 Q6ZSV7 163 aa11.07□□□□□ -0.64
RET-201ENST00000340058 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
RET-201ENST00000340058 SS18Q15532 418 aa11.06□□□□□ -0.64
RET-201ENST00000340058 Q6YL49 198 aa11.06□□□□□ -0.64
RET-201ENST00000340058 CST9LQ9H4G1 147 aa11.06□□□□□ -0.64
RET-201ENST00000340058 ODF1Q14990 250 aa11.06□□□□□ -0.64
RET-201ENST00000340058 C11orf86A6NJI1 115 aa11.05□□□□□ -0.64
RET-201ENST00000340058 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
RET-201ENST00000340058 K7EQG2 157 aa11.05□□□□□ -0.64
RET-201ENST00000340058 PROK1P58294 105 aa11.05□□□□□ -0.64
RET-201ENST00000340058 C2orf82Q6UX34 121 aa11.05□□□□□ -0.64
RET-201ENST00000340058 CEND1Q8N111 149 aa11.05□□□□□ -0.64
RET-201ENST00000340058 WFDC10AQ9H1F0 79 aa11.05□□□□□ -0.64
RET-201ENST00000340058 MAP6D1Q9H9H5 199 aa11.05□□□□□ -0.64
RET-201ENST00000340058 FGF6P10767 208 aa11.05□□□□□ -0.64
RET-201ENST00000340058 FLNAP21333 2647 aaKnown RBP11.05□□□□□ -0.64
RET-201ENST00000340058 C12orf74Q32Q52 190 aa11.04□□□□□ -0.64
RET-201ENST00000340058 CRLF1O75462 422 aa11.04□□□□□ -0.64
RET-201ENST00000340058 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
RET-201ENST00000340058 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
RET-201ENST00000340058 GYPEP15421 78 aa11.03□□□□□ -0.64
RET-201ENST00000340058 Q6ZTI0 123 aa11.03□□□□□ -0.64
RET-201ENST00000340058 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
RET-201ENST00000340058 Q9H8V8 135 aa11.03□□□□□ -0.64
RET-201ENST00000340058 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
RET-201ENST00000340058 TEP1Q99973 2627 aaKnown RBP11.03□□□□□ -0.64
RET-201ENST00000340058 A0A1W2PPM0 123 aa11.02□□□□□ -0.64
RET-201ENST00000340058 F8W735 103 aaPredicted RBP11.02□□□□□ -0.64
RET-201ENST00000340058 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.64
RET-201ENST00000340058 LINC00310P59036 64 aa11.02□□□□□ -0.65
RET-201ENST00000340058 HELZ2Q9BYK8 2649 aaKnown RBP11.02□□□□□ -0.65
RET-201ENST00000340058 H3BMM0 161 aa11.02□□□□□ -0.65
RET-201ENST00000340058 LEPROTO15243 131 aa11.02□□□□□ -0.65
RET-201ENST00000340058 MRPL52Q86TS9 123 aaKnown RBP11.02□□□□□ -0.65
RET-201ENST00000340058 ITPR3Q14573 2671 aa11.02□□□□□ -0.65
RET-201ENST00000340058 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
RET-201ENST00000340058 C4orf3Q8WVX3 66 aa11.01□□□□□ -0.65
RET-201ENST00000340058 PRO1854Q9UHT4 67 aa11.01□□□□□ -0.65
RET-201ENST00000340058 REV3LO60673 3130 aa11.01□□□□□ -0.65
RET-201ENST00000340058 PSMB8P28062 276 aa11.01□□□□□ -0.65
RET-201ENST00000340058 RHOHQ15669 191 aa11.01□□□□□ -0.65
RET-201ENST00000340058 MUC4Q99102 2169 aa11.01□□□□□ -0.65
RET-201ENST00000340058 DEFB114Q30KQ6 69 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms