RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ZNF56Q15929 161 aa12.83□□□□□ -0.36
ITGA4-202ENST00000339307 BIN3Q9NQY0 253 aa12.83□□□□□ -0.36
ITGA4-202ENST00000339307 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
ITGA4-202ENST00000339307 ELOBQ15370 118 aa12.82□□□□□ -0.36
ITGA4-202ENST00000339307 Q8N976 141 aa12.82□□□□□ -0.36
ITGA4-202ENST00000339307 DERL1Q9BUN8 251 aa12.82□□□□□ -0.36
ITGA4-202ENST00000339307 HERC1Q15751 4861 aa12.82□□□□□ -0.36
ITGA4-202ENST00000339307 TRBV7-3A0A075B6L6 115 aa12.81□□□□□ -0.36
ITGA4-202ENST00000339307 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
ITGA4-202ENST00000339307 PLA2G1BP04054 148 aaKnown RBP12.81□□□□□ -0.36
ITGA4-202ENST00000339307 GNG4P50150 75 aa12.81□□□□□ -0.36
ITGA4-202ENST00000339307 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 J3QL48 77 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 UBE2D3P61077 147 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 UBE2D2P62837 147 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 CENPWQ5EE01 88 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 PRR27Q6MZM9 219 aa12.8□□□□□ -0.36
ITGA4-202ENST00000339307 DMBT1Q9UGM3 2413 aaPredicted RBP12.8□□□□□ -0.36
ITGA4-202ENST00000339307 RAB19A4D1S5 217 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 F5H697 171 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
ITGA4-202ENST00000339307 LINC00528Q8N1L1 170 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.79□□□□□ -0.36
ITGA4-202ENST00000339307 OR10AG1Q8NH19 301 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 FLG2Q5D862 2391 aaPredicted RBP12.79□□□□□ -0.36
ITGA4-202ENST00000339307 RAB4BP61018 213 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 FAM74A3Q4VXF1 159 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
ITGA4-202ENST00000339307 CRPP02741 224 aa12.78□□□□□ -0.36
ITGA4-202ENST00000339307 Q0VG73 95 aa12.78□□□□□ -0.36
ITGA4-202ENST00000339307 CHCHD7Q9BUK0 85 aa12.78□□□□□ -0.36
ITGA4-202ENST00000339307 SRRM2Q9UQ35 2752 aaKnown RBP12.77□□□□□ -0.36
ITGA4-202ENST00000339307 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
ITGA4-202ENST00000339307 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
ITGA4-202ENST00000339307 C15orf54Q8N8G6 183 aa12.77□□□□□ -0.37
ITGA4-202ENST00000339307 TRBV6-8A0A0A6YYG3 113 aa12.76□□□□□ -0.37
ITGA4-202ENST00000339307 Q6ZSA8 131 aa12.76□□□□□ -0.37
ITGA4-202ENST00000339307 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
ITGA4-202ENST00000339307 CHCHD5Q9BSY4 110 aa12.76□□□□□ -0.37
ITGA4-202ENST00000339307 C1orf43Q9BWL3 253 aa12.76□□□□□ -0.37
ITGA4-202ENST00000339307 VPS13BQ7Z7G8 4022 aa12.75□□□□□ -0.37
ITGA4-202ENST00000339307 ANGP03950 147 aaKnown RBP12.75□□□□□ -0.37
ITGA4-202ENST00000339307 CXCL1P09341 107 aa12.75□□□□□ -0.37
ITGA4-202ENST00000339307 SMIM17P0DL12 118 aa12.75□□□□□ -0.37
ITGA4-202ENST00000339307 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
ITGA4-202ENST00000339307 ZNF727A8MUV8 499 aa12.74□□□□□ -0.37
ITGA4-202ENST00000339307 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
ITGA4-202ENST00000339307 OR10G8Q8NGN5 311 aa12.74□□□□□ -0.37
ITGA4-202ENST00000339307 DAZAP1Q96EP5 407 aaKnown RBP12.74□□□□□ -0.37
ITGA4-202ENST00000339307 CEBPGP53567 150 aa12.73□□□□□ -0.37
ITGA4-202ENST00000339307 MPV17L2Q567V2 206 aa12.73□□□□□ -0.37
ITGA4-202ENST00000339307 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
ITGA4-202ENST00000339307 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
ITGA4-202ENST00000339307 SRSF3P84103 164 aaKnown RBP12.72□□□□□ -0.37
ITGA4-202ENST00000339307 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
ITGA4-202ENST00000339307 ENHOQ6UWT2 76 aa12.72□□□□□ -0.37
ITGA4-202ENST00000339307 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.37
ITGA4-202ENST00000339307 C9JQL5 133 aa12.71□□□□□ -0.37
ITGA4-202ENST00000339307 SNAI2O43623 268 aa12.71□□□□□ -0.37
ITGA4-202ENST00000339307 HLA-DQA1P01909 254 aa12.71□□□□□ -0.37
ITGA4-202ENST00000339307 RPS20P60866 119 aaKnown RBP12.71□□□□□ -0.37
ITGA4-202ENST00000339307 C14orf177Q52M58 125 aa12.71□□□□□ -0.37
ITGA4-202ENST00000339307 MYCBP2O75592 4640 aa12.71□□□□□ -0.37
ITGA4-202ENST00000339307 XKRY2A2RUG3 117 aa12.71□□□□□ -0.38
ITGA4-202ENST00000339307 OR5AL1P0C617 328 aa12.71□□□□□ -0.38
ITGA4-202ENST00000339307 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.38
ITGA4-202ENST00000339307 ATRAIDQ6UW56 229 aa12.71□□□□□ -0.38
ITGA4-202ENST00000339307 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.38
ITGA4-202ENST00000339307 SSBP4Q9BWG4 385 aaPredicted RBP12.71□□□□□ -0.38
ITGA4-202ENST00000339307 P01737 135 aa12.7□□□□□ -0.38
ITGA4-202ENST00000339307 MGPP08493 103 aa12.7□□□□□ -0.38
ITGA4-202ENST00000339307 AP1S3Q96PC3 154 aa12.7□□□□□ -0.38
ITGA4-202ENST00000339307 CHAC1Q9BUX1 264 aa12.7□□□□□ -0.38
ITGA4-202ENST00000339307 NAT8Q9UHE5 227 aa12.7□□□□□ -0.38
ITGA4-202ENST00000339307 K7EN84 100 aa12.69□□□□□ -0.38
ITGA4-202ENST00000339307 PKIAP61925 76 aa12.69□□□□□ -0.38
ITGA4-202ENST00000339307 GAGE6Q13070 117 aa12.69□□□□□ -0.38
ITGA4-202ENST00000339307 CLPSL2Q6UWE3 100 aa12.69□□□□□ -0.38
ITGA4-202ENST00000339307 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
ITGA4-202ENST00000339307 LINC01551Q86U37 167 aa12.69□□□□□ -0.38
ITGA4-202ENST00000339307 LINC00862A6NCI5 91 aa12.68□□□□□ -0.38
ITGA4-202ENST00000339307 GZMBP10144 247 aa12.68□□□□□ -0.38
ITGA4-202ENST00000339307 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
ITGA4-202ENST00000339307 CIRBP-AS1Q8TBR5 109 aa12.68□□□□□ -0.38
ITGA4-202ENST00000339307 DNAH8Q96JB1 4490 aa12.67□□□□□ -0.38
ITGA4-202ENST00000339307 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
ITGA4-202ENST00000339307 NUDT10Q8NFP7 164 aa12.67□□□□□ -0.38
ITGA4-202ENST00000339307 NUDT11Q96G61 164 aa12.67□□□□□ -0.38
ITGA4-202ENST00000339307 TRBV25-1A0A075B6N4 114 aa12.66□□□□□ -0.38
ITGA4-202ENST00000339307 MIAQ16674 131 aa12.66□□□□□ -0.38
ITGA4-202ENST00000339307 NTM-AS1Q6ZSK4 140 aa12.66□□□□□ -0.38
ITGA4-202ENST00000339307 OR2D3Q8NGH3 330 aa12.66□□□□□ -0.38
ITGA4-202ENST00000339307 LINC00269Q8N2A0 174 aa12.65□□□□□ -0.38
ITGA4-202ENST00000339307 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
ITGA4-202ENST00000339307 OSTCQ9NRP0 149 aa12.65□□□□□ -0.38
ITGA4-202ENST00000339307 RBX1P62877 108 aa12.64□□□□□ -0.39
ITGA4-202ENST00000339307 CT83Q5H943 113 aa12.64□□□□□ -0.39
ITGA4-202ENST00000339307 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
ITGA4-202ENST00000339307 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms