RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
IFFO1-201ENST00000336604 MAPK1IP1LQ8NDC0 245 aa13.22□□□□□ -0.29
IFFO1-201ENST00000336604 SYNJ2BPP57105 145 aa13.21□□□□□ -0.29
IFFO1-201ENST00000336604 ATP6V0E2Q8NHE4 81 aa13.21□□□□□ -0.29
IFFO1-201ENST00000336604 DUX5Q96PT3 197 aa13.21□□□□□ -0.29
IFFO1-201ENST00000336604 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.3
IFFO1-201ENST00000336604 PMVKQ15126 192 aa13.2□□□□□ -0.3
IFFO1-201ENST00000336604 ZNF56Q15929 161 aa13.2□□□□□ -0.3
IFFO1-201ENST00000336604 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
IFFO1-201ENST00000336604 TRBV27A0A0K0K1C4 114 aa13.2□□□□□ -0.3
IFFO1-201ENST00000336604 LGALS9O00182 355 aa13.2□□□□□ -0.3
IFFO1-201ENST00000336604 ANKRD17O75179 2603 aaKnown RBP13.19□□□□□ -0.3
IFFO1-201ENST00000336604 TCL1BO95988 128 aa13.19□□□□□ -0.3
IFFO1-201ENST00000336604 PPDPFLQ8WWR9 84 aa13.19□□□□□ -0.3
IFFO1-201ENST00000336604 SS18L2Q9UHA2 77 aa13.19□□□□□ -0.3
IFFO1-201ENST00000336604 ZNF580Q9UK33 172 aa13.19□□□□□ -0.3
IFFO1-201ENST00000336604 CUBNO60494 3623 aa13.19□□□□□ -0.3
IFFO1-201ENST00000336604 UBE2D1P51668 147 aa13.19□□□□□ -0.3
IFFO1-201ENST00000336604 K7EQG2 157 aa13.18□□□□□ -0.3
IFFO1-201ENST00000336604 TEN1Q86WV5 123 aa13.18□□□□□ -0.3
IFFO1-201ENST00000336604 ZNRF2Q8NHG8 242 aa13.18□□□□□ -0.3
IFFO1-201ENST00000336604 M0QY20 66 aa13.18□□□□□ -0.3
IFFO1-201ENST00000336604 TMEM170BQ5T4T1 132 aa13.18□□□□□ -0.3
IFFO1-201ENST00000336604 OPRPNQ99935 248 aaPredicted RBP13.18□□□□□ -0.3
IFFO1-201ENST00000336604 ANAPC13Q9BS18 74 aa13.18□□□□□ -0.3
IFFO1-201ENST00000336604 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 TIMM17AQ99595 171 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 FAM208BQ5VWN6 2430 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 SCGB1C2P0DMR2 95 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 UBE2D3P61077 147 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 UBE2D2P62837 147 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 ODF3Q96PU9 254 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
IFFO1-201ENST00000336604 IGHV1OR15-1A0A075B7D0 117 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 ZFYVE26Q68DK2 2539 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 ANKRD29Q8N6D5 301 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 HERVK_113P61574 105 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
IFFO1-201ENST00000336604 A8MWV9 139 aa13.15□□□□□ -0.3
IFFO1-201ENST00000336604 ZNF876PQ49A33 203 aa13.15□□□□□ -0.3
IFFO1-201ENST00000336604 LRRK2Q5S007 2527 aa13.15□□□□□ -0.3
IFFO1-201ENST00000336604 A0A0J9YY99 117 aa13.15□□□□□ -0.31
IFFO1-201ENST00000336604 LINC01356Q8N9X3 169 aa13.15□□□□□ -0.31
IFFO1-201ENST00000336604 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
IFFO1-201ENST00000336604 HTN1P15515 57 aa13.14□□□□□ -0.31
IFFO1-201ENST00000336604 RAX2Q96IS3 184 aa13.13□□□□□ -0.31
IFFO1-201ENST00000336604 H7C2G1 150 aa13.13□□□□□ -0.31
IFFO1-201ENST00000336604 P0DMU3 169 aa13.13□□□□□ -0.31
IFFO1-201ENST00000336604 FAM231AP0DMU4 169 aa13.13□□□□□ -0.31
IFFO1-201ENST00000336604 FAM231CP0DMU5 169 aa13.13□□□□□ -0.31
IFFO1-201ENST00000336604 CFC1BP0CG36 223 aa13.12□□□□□ -0.31
IFFO1-201ENST00000336604 CFC1P0CG37 223 aa13.12□□□□□ -0.31
IFFO1-201ENST00000336604 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
IFFO1-201ENST00000336604 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
IFFO1-201ENST00000336604 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
IFFO1-201ENST00000336604 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
IFFO1-201ENST00000336604 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 DSCR9P59020 149 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
IFFO1-201ENST00000336604 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
IFFO1-201ENST00000336604 TEX29Q8N6K0 151 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 PTPN13Q12923 2485 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 A0A096LNT2 108 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 B5MCH6 92 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 NSUN5P1Q3KNT7 163 aa13.11□□□□□ -0.31
IFFO1-201ENST00000336604 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 AMELXQ99217 191 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 TEX15Q9BXT5 2789 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 IGHV3-73A0A0B4J1V6 119 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 J3QQQ9 107 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 PRM2P04554 102 aa13.1□□□□□ -0.31
IFFO1-201ENST00000336604 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
IFFO1-201ENST00000336604 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
IFFO1-201ENST00000336604 C9JAW5 83 aa13.09□□□□□ -0.31
IFFO1-201ENST00000336604 RHOHQ15669 191 aa13.09□□□□□ -0.31
IFFO1-201ENST00000336604 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
IFFO1-201ENST00000336604 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
IFFO1-201ENST00000336604 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
IFFO1-201ENST00000336604 TRBV20-1A0A075B6N2 111 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 IGHV3-64A0A075B6Q5 118 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 IGHV3-30P01768 117 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 IGHV3-30-5P0DP03 117 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 C10orf126Q8N4M7 172 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.31
IFFO1-201ENST00000336604 ZNF462Q96JM2 2506 aa13.08□□□□□ -0.32
IFFO1-201ENST00000336604 UBE2E2Q96LR5 201 aa13.08□□□□□ -0.32
IFFO1-201ENST00000336604 I3L3M4 83 aa13.07□□□□□ -0.32
IFFO1-201ENST00000336604 PROK1P58294 105 aa13.07□□□□□ -0.32
IFFO1-201ENST00000336604 SLC25A20O43772 301 aa13.07□□□□□ -0.32
IFFO1-201ENST00000336604 ELANEP08246 267 aa13.07□□□□□ -0.32
IFFO1-201ENST00000336604 LGALS3P17931 250 aaKnown RBP13.07□□□□□ -0.32
IFFO1-201ENST00000336604 SLURP1P55000 103 aa13.07□□□□□ -0.32
IFFO1-201ENST00000336604 PRO1854Q9UHT4 67 aa13.07□□□□□ -0.32
IFFO1-201ENST00000336604 TRGV11A0A075B6L2 103 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms