RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 B4DSR2 109 aa14.76□□□□□ -0.05
CDCA4-201ENST00000336219 TRPT1Q86TN4 253 aaKnown RBP14.76□□□□□ -0.05
CDCA4-201ENST00000336219 PRO1854Q9UHT4 67 aa14.76□□□□□ -0.05
CDCA4-201ENST00000336219 SPG11Q96JI7 2443 aa14.76□□□□□ -0.05
CDCA4-201ENST00000336219 A8MWV9 139 aa14.75□□□□□ -0.05
CDCA4-201ENST00000336219 ZNF56Q15929 161 aa14.75□□□□□ -0.05
CDCA4-201ENST00000336219 ZNF688P0C7X2 276 aa14.75□□□□□ -0.05
CDCA4-201ENST00000336219 TRAV2A0A0B4J234 112 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 ODF3Q96PU9 254 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 TRBV27A0A0K0K1C4 114 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 LGALS9O00182 355 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 LYRM7Q5U5X0 104 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 C10orf99Q6UWK7 81 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 C9orf85Q96MD7 179 aa14.74□□□□□ -0.05
CDCA4-201ENST00000336219 IGHV4-59P01825 116 aa14.73□□□□□ -0.05
CDCA4-201ENST00000336219 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
CDCA4-201ENST00000336219 IGHV3-16A0A0C4DH30 117 aa14.73□□□□□ -0.05
CDCA4-201ENST00000336219 CELSR2Q9HCU4 2923 aa14.73□□□□□ -0.05
CDCA4-201ENST00000336219 A0A0J9YX75 114 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 P0DMU3 169 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 FAM231AP0DMU4 169 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 FAM231CP0DMU5 169 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 SBSPONQ8IVN8 264 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 TRBV20-1A0A075B6N2 111 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 TRBV6-5A0A0K0K1A5 114 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 ELANEP08246 267 aa14.72□□□□□ -0.05
CDCA4-201ENST00000336219 M0QY20 66 aa14.71□□□□□ -0.05
CDCA4-201ENST00000336219 DEFB112Q30KQ8 113 aa14.71□□□□□ -0.05
CDCA4-201ENST00000336219 TMEM223A0PJW6 202 aa14.71□□□□□ -0.05
CDCA4-201ENST00000336219 ADARB2-AS1A8MUL3 147 aa14.71□□□□□ -0.05
CDCA4-201ENST00000336219 C9JAW5 83 aa14.71□□□□□ -0.05
CDCA4-201ENST00000336219 MUSTN1Q8IVN3 82 aa14.71□□□□□ -0.05
CDCA4-201ENST00000336219 A0A0J9YXV3 536 aa14.7□□□□□ -0.06
CDCA4-201ENST00000336219 GATA3P23771 443 aa14.7□□□□□ -0.06
CDCA4-201ENST00000336219 SNRPD3P62318 126 aaKnown RBP14.7□□□□□ -0.06
CDCA4-201ENST00000336219 Q8N1Y9 231 aa14.7□□□□□ -0.06
CDCA4-201ENST00000336219 K7EQG2 157 aa14.7□□□□□ -0.06
CDCA4-201ENST00000336219 SLC25A20O43772 301 aa14.69□□□□□ -0.06
CDCA4-201ENST00000336219 IGHV3-33P01772 117 aa14.69□□□□□ -0.06
CDCA4-201ENST00000336219 ZNF22P17026 224 aaPredicted RBP14.69□□□□□ -0.06
CDCA4-201ENST00000336219 TMEM263Q8WUH6 116 aaKnown RBP14.69□□□□□ -0.06
CDCA4-201ENST00000336219 PKD1L2Q7Z442 2459 aa14.69□□□□□ -0.06
CDCA4-201ENST00000336219 TMEM89A2RUT3 159 aa14.68□□□□□ -0.06
CDCA4-201ENST00000336219 LEPROTO15243 131 aa14.68□□□□□ -0.06
CDCA4-201ENST00000336219 SPINK13Q1W4C9 94 aa14.68□□□□□ -0.06
CDCA4-201ENST00000336219 SORL1Q92673 2214 aa14.68□□□□□ -0.06
CDCA4-201ENST00000336219 BEX4Q9NWD9 120 aaPredicted RBP14.67□□□□□ -0.06
CDCA4-201ENST00000336219 RHODO00212 210 aa14.67□□□□□ -0.06
CDCA4-201ENST00000336219 IGHV1OR15-1A0A075B7D0 117 aa14.66□□□□□ -0.06
CDCA4-201ENST00000336219 NRGNQ92686 78 aa14.66□□□□□ -0.06
CDCA4-201ENST00000336219 CFAP46Q8IYW2 2715 aa14.66□□□□□ -0.06
CDCA4-201ENST00000336219 NSUN5P1Q3KNT7 163 aa14.66□□□□□ -0.06
CDCA4-201ENST00000336219 RNF183Q96D59 192 aa14.66□□□□□ -0.06
CDCA4-201ENST00000336219 ERG28Q9UKR5 140 aa14.66□□□□□ -0.06
CDCA4-201ENST00000336219 IGHV3-73A0A0B4J1V6 119 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 SYNJ2BPP57105 145 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 Q1RN00 199 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 RNASE13Q5GAN3 156 aaKnown RBP14.65□□□□□ -0.06
CDCA4-201ENST00000336219 DOPEY1Q5JWR5 2465 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 IGLV4-3A0A075B6K6 122 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 DSCR9P59020 149 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 CEMP1Q6PRD7 247 aaPredicted RBP14.65□□□□□ -0.06
CDCA4-201ENST00000336219 C20orf203Q8NBC4 194 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 SPXQ9BT56 116 aa14.65□□□□□ -0.06
CDCA4-201ENST00000336219 LINC01356Q8N9X3 169 aa14.64□□□□□ -0.07
CDCA4-201ENST00000336219 RHOHQ15669 191 aa14.63□□□□□ -0.07
CDCA4-201ENST00000336219 PROK1P58294 105 aa14.63□□□□□ -0.07
CDCA4-201ENST00000336219 VCX2Q9H322 139 aa14.63□□□□□ -0.07
CDCA4-201ENST00000336219 TRAV8-3A0A0A6YYJ7 113 aa14.62□□□□□ -0.07
CDCA4-201ENST00000336219 A0A0J9YXY3 114 aa14.62□□□□□ -0.07
CDCA4-201ENST00000336219 HTN1P15515 57 aa14.62□□□□□ -0.07
CDCA4-201ENST00000336219 FLNCQ14315 2725 aa14.62□□□□□ -0.07
CDCA4-201ENST00000336219 NTN5Q8WTR8 489 aaPredicted RBP14.62□□□□□ -0.07
CDCA4-201ENST00000336219 CSMD2Q7Z408 3487 aa14.62□□□□□ -0.07
CDCA4-201ENST00000336219 I3L3M4 83 aa14.61□□□□□ -0.07
CDCA4-201ENST00000336219 DUX5Q96PT3 197 aa14.61□□□□□ -0.07
CDCA4-201ENST00000336219 USP9XQ93008 2570 aaPredicted RBP14.61□□□□□ -0.07
CDCA4-201ENST00000336219 A0A0B4J2C4 111 aa14.61□□□□□ -0.07
CDCA4-201ENST00000336219 PRM2P04554 102 aa14.61□□□□□ -0.07
CDCA4-201ENST00000336219 NPC2P61916 151 aa14.61□□□□□ -0.07
CDCA4-201ENST00000336219 DOPEY2Q9Y3R5 2298 aa14.61□□□□□ -0.07
CDCA4-201ENST00000336219 A8MZ25 164 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 M0R2P5 195 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 Q6ZSV7 163 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 FAM104AQ969W3 186 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 Q9UF83 564 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 IGHV3-30-3P0DP02 117 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 HOXD3P31249 432 aaPredicted RBP14.6□□□□□ -0.07
CDCA4-201ENST00000336219 RNF152Q8N8N0 203 aa14.6□□□□□ -0.07
CDCA4-201ENST00000336219 A0A096LNT2 108 aa14.59□□□□□ -0.07
CDCA4-201ENST00000336219 TRIAP1O43715 76 aa14.59□□□□□ -0.07
CDCA4-201ENST00000336219 TRGV11A0A075B6L2 103 aa14.58□□□□□ -0.07
CDCA4-201ENST00000336219 J3QLI3 93 aa14.58□□□□□ -0.07
CDCA4-201ENST00000336219 PRSS2P07478 247 aa14.58□□□□□ -0.07
CDCA4-201ENST00000336219 ADAMTSL4-AS1Q5T5F5 129 aa14.58□□□□□ -0.07
CDCA4-201ENST00000336219 VPREB3Q9UKI3 123 aa14.58□□□□□ -0.07
CDCA4-201ENST00000336219 TEX49A0A1B0GTD5 131 aa14.58□□□□□ -0.08
CDCA4-201ENST00000336219 CRLF1O75462 422 aa14.58□□□□□ -0.08
CDCA4-201ENST00000336219 CD28P10747 220 aa14.58□□□□□ -0.08
CDCA4-201ENST00000336219 LINC01620Q4KN68 170 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms