RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FOXC2Q99958 501 aa9.3□□□□□ -0.92
LIMK1-201ENST00000336180 AP1S3Q96PC3 154 aa9.3□□□□□ -0.92
LIMK1-201ENST00000336180 CCL24O00175 119 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 P0DMU3 169 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 FAM231AP0DMU4 169 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 FAM231CP0DMU5 169 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 EMP1P54849 157 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 C4orf3Q8WVX3 66 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 Q9UF83 564 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 H3BUT2 72 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 ZNF256Q9Y2P7 627 aaPredicted RBP9.29□□□□□ -0.92
LIMK1-201ENST00000336180 LENEPQ9Y5L5 61 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
LIMK1-201ENST00000336180 INAFM1C9JVW0 142 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 NMUP48645 174 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 ZNF56Q15929 161 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 Q8N2B8 174 aa9.29□□□□□ -0.92
LIMK1-201ENST00000336180 TMEM89A2RUT3 159 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 LY6G6DO95868 133 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 LGALS9O00182 355 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 DEFB114Q30KQ6 69 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 TRRAPQ9Y4A5 3859 aa9.28□□□□□ -0.92
LIMK1-201ENST00000336180 K7EP34 96 aa9.27□□□□□ -0.92
LIMK1-201ENST00000336180 ZNF876PQ49A33 203 aa9.27□□□□□ -0.92
LIMK1-201ENST00000336180 LINC01545Q5VT33 79 aa9.27□□□□□ -0.92
LIMK1-201ENST00000336180 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.92
LIMK1-201ENST00000336180 TMEM160Q9NX00 188 aa9.27□□□□□ -0.92
LIMK1-201ENST00000336180 IGHV1OR15-1A0A075B7D0 117 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 IGHV3-16A0A0C4DH30 117 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 MRPL23Q16540 153 aaKnown RBP9.27□□□□□ -0.93
LIMK1-201ENST00000336180 AMTNQ6UX39 209 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 IGLV2-18A0A075B6J9 118 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 RNF152Q8N8N0 203 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 PEMTQ9UBM1 199 aa9.27□□□□□ -0.93
LIMK1-201ENST00000336180 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
LIMK1-201ENST00000336180 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 Q8N8P6 123 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 SPATA3Q8NHX4 192 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 F8P00451 2351 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 A0A087WX48 190 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 H3BMM0 161 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 K7EMI3 77 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 SUMO2P61956 95 aaKnown RBP9.26□□□□□ -0.93
LIMK1-201ENST00000336180 GTSCR1Q86UQ5 136 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 FCER1GP30273 86 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
LIMK1-201ENST00000336180 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
LIMK1-201ENST00000336180 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
LIMK1-201ENST00000336180 LAGE3Q14657 143 aa9.25□□□□□ -0.93
LIMK1-201ENST00000336180 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
LIMK1-201ENST00000336180 LINC01587Q99440 93 aa9.25□□□□□ -0.93
LIMK1-201ENST00000336180 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
LIMK1-201ENST00000336180 SCRT2Q9NQ03 307 aa9.25□□□□□ -0.93
LIMK1-201ENST00000336180 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 IGKV2D-26A0A0A0MRZ7 120 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 CCDC179H3BU77 68 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 LINC00315P59091 139 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 C12orf54Q6X4T0 127 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
LIMK1-201ENST00000336180 MRPL35Q9NZE8 188 aaKnown RBP9.24□□□□□ -0.93
LIMK1-201ENST00000336180 IGHV4-4A0A075B6R2 117 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 WIPF1O43516 503 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 RAB37Q96AX2 223 aa9.24□□□□□ -0.93
LIMK1-201ENST00000336180 J3QR89 54 aa9.23□□□□□ -0.93
LIMK1-201ENST00000336180 SPAG8Q99932 426 aaPredicted RBP9.23□□□□□ -0.93
LIMK1-201ENST00000336180 IGHV3-53P01767 116 aa9.23□□□□□ -0.93
LIMK1-201ENST00000336180 KRTAP10-3P60369 221 aa9.23□□□□□ -0.93
LIMK1-201ENST00000336180 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
LIMK1-201ENST00000336180 KIF25-AS1Q9Y6Z4 181 aa9.23□□□□□ -0.93
LIMK1-201ENST00000336180 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
LIMK1-201ENST00000336180 DUSP14O95147 198 aaKnown RBP9.22□□□□□ -0.93
LIMK1-201ENST00000336180 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
LIMK1-201ENST00000336180 INSL3P51460 131 aa9.22□□□□□ -0.93
LIMK1-201ENST00000336180 SCGB3A1Q96QR1 104 aa9.22□□□□□ -0.93
LIMK1-201ENST00000336180 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
LIMK1-201ENST00000336180 IGHV3-38A0A0C4DH36 116 aa9.21□□□□□ -0.93
LIMK1-201ENST00000336180 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.93
LIMK1-201ENST00000336180 ST20Q9HBF5 79 aa9.21□□□□□ -0.93
LIMK1-201ENST00000336180 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.94
LIMK1-201ENST00000336180 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
LIMK1-201ENST00000336180 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
LIMK1-201ENST00000336180 Q6ZSN1 163 aa9.21□□□□□ -0.94
LIMK1-201ENST00000336180 C3orf56Q8N813 242 aa9.21□□□□□ -0.94
LIMK1-201ENST00000336180 CRYGDP07320 174 aa9.2□□□□□ -0.94
LIMK1-201ENST00000336180 STHQ8IWL8 128 aa9.2□□□□□ -0.94
LIMK1-201ENST00000336180 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
LIMK1-201ENST00000336180 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
LIMK1-201ENST00000336180 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
LIMK1-201ENST00000336180 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
LIMK1-201ENST00000336180 TMEM86BQ8N661 226 aa9.2□□□□□ -0.94
LIMK1-201ENST00000336180 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
LIMK1-201ENST00000336180 F8WDY8 70 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 PHLDA1Q8WV24 401 aaPredicted RBP9.19□□□□□ -0.94
LIMK1-201ENST00000336180 TP53TG1Q9Y2A0 90 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms