RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CLPSL2Q6UWE3 100 aa13.03□□□□□ -0.32
TRAPPC11-201ENST00000334690 NRGNQ92686 78 aa13.03□□□□□ -0.32
TRAPPC11-201ENST00000334690 ATP6V0E2Q8NHE4 81 aa13.03□□□□□ -0.32
TRAPPC11-201ENST00000334690 KIAA1549Q9HCM3 1950 aa13.02□□□□□ -0.32
TRAPPC11-201ENST00000334690 TMEM61Q8N0U2 210 aa13.02□□□□□ -0.32
TRAPPC11-201ENST00000334690 LY6LH3BQJ8 138 aa13.02□□□□□ -0.33
TRAPPC11-201ENST00000334690 TEN1Q86WV5 123 aa13.02□□□□□ -0.33
TRAPPC11-201ENST00000334690 RMI2Q96E14 147 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 BAALC-AS2P0C853 105 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 Q71RC1 249 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 C15orf53Q8NAA6 179 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 MDFICQ9P1T7 246 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 DSCAML1Q8TD84 2053 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 MYCNOSP40205 109 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 C9orf66Q5T8R8 295 aa13.01□□□□□ -0.33
TRAPPC11-201ENST00000334690 A0A0J9YY99 117 aa13□□□□□ -0.33
TRAPPC11-201ENST00000334690 HAMPP81172 84 aa13□□□□□ -0.33
TRAPPC11-201ENST00000334690 H0YGX0 51 aa13□□□□□ -0.33
TRAPPC11-201ENST00000334690 GYPEP15421 78 aa13□□□□□ -0.33
TRAPPC11-201ENST00000334690 ACYP1P07311 99 aa13□□□□□ -0.33
TRAPPC11-201ENST00000334690 DSCR8Q96T75 97 aa13□□□□□ -0.33
TRAPPC11-201ENST00000334690 CEP192Q8TEP8 1941 aa12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 SND1-IT1Q9HBX3 110 aa12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 LINC01620Q4KN68 170 aa12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 RNASE8Q8TDE3 154 aaKnown RBP12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 ODF3Q96PU9 254 aa12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 WFDC2Q14508 124 aa12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
TRAPPC11-201ENST00000334690 VSIG2Q96IQ7 327 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 TRBV10-1A0A0K0K1A3 114 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 PRB1P04280 392 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 ATP5G1P05496 136 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 C4orf3Q8WVX3 66 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 ICOSQ9Y6W8 199 aa12.98□□□□□ -0.33
TRAPPC11-201ENST00000334690 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
TRAPPC11-201ENST00000334690 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
TRAPPC11-201ENST00000334690 TP53TG3Q9ULZ0 132 aa12.97□□□□□ -0.33
TRAPPC11-201ENST00000334690 CEP295Q9C0D2 2601 aa12.97□□□□□ -0.33
TRAPPC11-201ENST00000334690 ORMDL1Q9P0S3 153 aa12.97□□□□□ -0.33
TRAPPC11-201ENST00000334690 SPART-AS1P0CW21 52 aa12.96□□□□□ -0.33
TRAPPC11-201ENST00000334690 Q6ZQT7 251 aa12.96□□□□□ -0.33
TRAPPC11-201ENST00000334690 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
TRAPPC11-201ENST00000334690 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
TRAPPC11-201ENST00000334690 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
TRAPPC11-201ENST00000334690 TINCRA0A1B0GVN0 87 aa12.95□□□□□ -0.34
TRAPPC11-201ENST00000334690 COX7A2LO14548 114 aa12.95□□□□□ -0.34
TRAPPC11-201ENST00000334690 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
TRAPPC11-201ENST00000334690 CRYBA4P53673 196 aa12.95□□□□□ -0.34
TRAPPC11-201ENST00000334690 TANC2Q9HCD6 1990 aa12.94□□□□□ -0.34
TRAPPC11-201ENST00000334690 K7EQG2 157 aa12.94□□□□□ -0.34
TRAPPC11-201ENST00000334690 CRIP1P50238 77 aa12.94□□□□□ -0.34
TRAPPC11-201ENST00000334690 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
TRAPPC11-201ENST00000334690 CITED1Q99966 193 aa12.94□□□□□ -0.34
TRAPPC11-201ENST00000334690 TMEM263Q8WUH6 116 aaKnown RBP12.93□□□□□ -0.34
TRAPPC11-201ENST00000334690 USP9XQ93008 2570 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC11-201ENST00000334690 C1orf43Q9BWL3 253 aa12.93□□□□□ -0.34
TRAPPC11-201ENST00000334690 C11orf71Q6IPW1 123 aa12.93□□□□□ -0.34
TRAPPC11-201ENST00000334690 IGHV3-30-3P0DP02 117 aa12.92□□□□□ -0.34
TRAPPC11-201ENST00000334690 TLN2Q9Y4G6 2542 aa12.92□□□□□ -0.34
TRAPPC11-201ENST00000334690 LGALS9O00182 355 aa12.92□□□□□ -0.34
TRAPPC11-201ENST00000334690 HHLA3Q9XRX5 114 aa12.92□□□□□ -0.34
TRAPPC11-201ENST00000334690 H3BT86 120 aa12.91□□□□□ -0.34
TRAPPC11-201ENST00000334690 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
TRAPPC11-201ENST00000334690 MAP6D1Q9H9H5 199 aa12.91□□□□□ -0.34
TRAPPC11-201ENST00000334690 IGLV2-11P01706 119 aa12.91□□□□□ -0.34
TRAPPC11-201ENST00000334690 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
TRAPPC11-201ENST00000334690 C19orf84I3L1E1 186 aa12.9□□□□□ -0.34
TRAPPC11-201ENST00000334690 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
TRAPPC11-201ENST00000334690 FOXI1Q12951 378 aa12.9□□□□□ -0.34
TRAPPC11-201ENST00000334690 DAND5Q8N907 189 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 OPRPNQ99935 248 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 CITED2Q99967 270 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 IGLV10-54A0A075B6I4 117 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 SMAD5-AS1Q9Y6J3 95 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 LRP4O75096 1905 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 NDUFA11Q86Y39 141 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 Q8N6K4 173 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 U3KQK5 164 aa12.89□□□□□ -0.35
TRAPPC11-201ENST00000334690 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 CLPSL1A2RUU4 121 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 PRORYQ9H606 182 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 NEXN-AS1Q8NBZ9 246 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 CAMK2N2Q96S95 79 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 CENPFP49454 3210 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 CXCL5P42830 114 aa12.88□□□□□ -0.35
TRAPPC11-201ENST00000334690 USP9YO00507 2555 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC11-201ENST00000334690 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC11-201ENST00000334690 INSL3P51460 131 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 Q6ZUT4 128 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 LRRC75A-AS1Q8N1F1 130 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
TRAPPC11-201ENST00000334690 Q6YL49 198 aa12.85□□□□□ -0.35
TRAPPC11-201ENST00000334690 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
TRAPPC11-201ENST00000334690 RNF185Q96GF1 192 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 251.5 ms