RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 TSPEAR-AS2P59090 65 aa17.21■□□□□ 0.34
NDEL1-201ENST00000334527 DEFB131AP59861 70 aa17.21■□□□□ 0.34
NDEL1-201ENST00000334527 CR1P17927 2039 aa17.2■□□□□ 0.34
NDEL1-201ENST00000334527 I3L3M4 83 aa17.2■□□□□ 0.34
NDEL1-201ENST00000334527 A0A0J9YY99 117 aa17.19■□□□□ 0.34
NDEL1-201ENST00000334527 TEX48A0A1B0GUV7 120 aa17.19■□□□□ 0.34
NDEL1-201ENST00000334527 F8W1H4 67 aa17.19■□□□□ 0.34
NDEL1-201ENST00000334527 PGPEP1Q9NXJ5 209 aa17.19■□□□□ 0.34
NDEL1-201ENST00000334527 FAM208BQ5VWN6 2430 aa17.19■□□□□ 0.34
NDEL1-201ENST00000334527 C20orf203Q8NBC4 194 aa17.18■□□□□ 0.34
NDEL1-201ENST00000334527 KRTAP10-9P60411 292 aa17.18■□□□□ 0.34
NDEL1-201ENST00000334527 WFDC2Q14508 124 aa17.17■□□□□ 0.34
NDEL1-201ENST00000334527 MRPL16Q9NX20 251 aaKnown RBP17.17■□□□□ 0.34
NDEL1-201ENST00000334527 IGHV3-73A0A0B4J1V6 119 aa17.17■□□□□ 0.34
NDEL1-201ENST00000334527 NFE4Q86UQ8 179 aa17.17■□□□□ 0.34
NDEL1-201ENST00000334527 UBE2D1P51668 147 aa17.16■□□□□ 0.34
NDEL1-201ENST00000334527 H3BMM0 161 aa17.16■□□□□ 0.34
NDEL1-201ENST00000334527 DUX3Q96PT4 197 aa17.16■□□□□ 0.34
NDEL1-201ENST00000334527 J3QQQ9 107 aa17.15■□□□□ 0.34
NDEL1-201ENST00000334527 ZNF462Q96JM2 2506 aa17.15■□□□□ 0.34
NDEL1-201ENST00000334527 RBMY1BA6NDE4 496 aaKnown RBP17.15■□□□□ 0.34
NDEL1-201ENST00000334527 RBMY1EA6NEQ0 496 aaKnown RBP17.15■□□□□ 0.34
NDEL1-201ENST00000334527 RBMY1DP0C7P1 496 aaKnown RBP17.15■□□□□ 0.34
NDEL1-201ENST00000334527 COTL1Q14019 142 aa17.14■□□□□ 0.33
NDEL1-201ENST00000334527 Q5PR19 223 aa17.14■□□□□ 0.33
NDEL1-201ENST00000334527 PRM2P04554 102 aa17.14■□□□□ 0.33
NDEL1-201ENST00000334527 LGALS3P17931 250 aaKnown RBP17.14■□□□□ 0.33
NDEL1-201ENST00000334527 TMEM61Q8N0U2 210 aa17.14■□□□□ 0.33
NDEL1-201ENST00000334527 Q8N2B8 174 aa17.14■□□□□ 0.33
NDEL1-201ENST00000334527 BBC3Q96PG8 261 aaPredicted RBP17.14■□□□□ 0.33
NDEL1-201ENST00000334527 LRRK2Q5S007 2527 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 A8MTW9 85 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 PROK1P58294 105 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 GAGE13Q4V321 117 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 AMELXQ99217 191 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 CREBBPQ92793 2442 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 KHDC1LQ5JSQ8 128 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 MTURNQ8N3F0 131 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 SPANXB1Q9NS25 103 aaPredicted RBP17.13■□□□□ 0.33
NDEL1-201ENST00000334527 PEMTQ9UBM1 199 aa17.13■□□□□ 0.33
NDEL1-201ENST00000334527 ZFYVE26Q68DK2 2539 aa17.12■□□□□ 0.33
NDEL1-201ENST00000334527 IGLV4-3A0A075B6K6 122 aa17.12■□□□□ 0.33
NDEL1-201ENST00000334527 APOMO95445 188 aa17.12■□□□□ 0.33
NDEL1-201ENST00000334527 SLC25A29Q8N8R3 303 aa17.12■□□□□ 0.33
NDEL1-201ENST00000334527 TMEM223A0PJW6 202 aa17.11■□□□□ 0.33
NDEL1-201ENST00000334527 DEFB113Q30KQ7 82 aa17.11■□□□□ 0.33
NDEL1-201ENST00000334527 VCX2Q9H322 139 aa17.11■□□□□ 0.33
NDEL1-201ENST00000334527 EDA2RQ9HAV5 297 aa17.11■□□□□ 0.33
NDEL1-201ENST00000334527 UBR5O95071 2799 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-201ENST00000334527 TEX15Q9BXT5 2789 aa17.11■□□□□ 0.33
NDEL1-201ENST00000334527 TSPAN13O95857 204 aa17.1■□□□□ 0.33
NDEL1-201ENST00000334527 IGHV3-30P01768 117 aa17.1■□□□□ 0.33
NDEL1-201ENST00000334527 IGHV3-30-5P0DP03 117 aa17.1■□□□□ 0.33
NDEL1-201ENST00000334527 C4orf3Q8WVX3 66 aa17.1■□□□□ 0.33
NDEL1-201ENST00000334527 TRAV2A0A0B4J234 112 aa17.1■□□□□ 0.33
NDEL1-201ENST00000334527 ZNF22P17026 224 aaPredicted RBP17.1■□□□□ 0.33
NDEL1-201ENST00000334527 PRO0461Q9UI25 63 aa17.1■□□□□ 0.33
NDEL1-201ENST00000334527 USP24Q9UPU5 2620 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 A0A0J9YXV3 536 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 M0R2P5 195 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 LEPROTO15243 131 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 PRRC2AP48634 2157 aaKnown RBP17.09■□□□□ 0.33
NDEL1-201ENST00000334527 RHODO00212 210 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 SH2D6Q7Z4S9 175 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 DLX4Q92988 240 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-201ENST00000334527 Q96MF0 132 aa17.09■□□□□ 0.33
NDEL1-201ENST00000334527 SPAG8Q99932 426 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-201ENST00000334527 PTPN13Q12923 2485 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 IGHV3-64A0A075B6Q5 118 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 ETDBQ3ZM63 59 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 SFTA2Q6UW10 78 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 NDUFA11Q86Y39 141 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 DYNLRB2Q8TF09 96 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 TNFRSF18Q9Y5U5 241 aa17.08■□□□□ 0.33
NDEL1-201ENST00000334527 A8MWV9 139 aa17.08■□□□□ 0.32
NDEL1-201ENST00000334527 ZNF415Q09FC8 603 aa17.08■□□□□ 0.32
NDEL1-201ENST00000334527 HIST2H2BDQ6DRA6 164 aa17.08■□□□□ 0.32
NDEL1-201ENST00000334527 MAP6D1Q9H9H5 199 aa17.08■□□□□ 0.32
NDEL1-201ENST00000334527 LOC107984156A0A0G2JMH3 177 aa17.07■□□□□ 0.32
NDEL1-201ENST00000334527 ARL17AQ8IVW1 177 aa17.07■□□□□ 0.32
NDEL1-201ENST00000334527 CD28P10747 220 aa17.06■□□□□ 0.32
NDEL1-201ENST00000334527 NAV2Q8IVL1 2488 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 CFC1BP0CG36 223 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 CFC1P0CG37 223 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 ZNF843Q8N446 348 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 Q9UF83 564 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 PYGO1Q9Y3Y4 419 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 ABCA12Q86UK0 2595 aa17.05■□□□□ 0.32
NDEL1-201ENST00000334527 Q6ZSN1 163 aa17.04■□□□□ 0.32
NDEL1-201ENST00000334527 LRRC75A-AS1Q8N1F1 130 aa17.04■□□□□ 0.32
NDEL1-201ENST00000334527 LINC01587Q99440 93 aa17.04■□□□□ 0.32
NDEL1-201ENST00000334527 DEFB114Q30KQ6 69 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 CEMP1Q6PRD7 247 aaPredicted RBP17.03■□□□□ 0.32
NDEL1-201ENST00000334527 FAM104AQ969W3 186 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 RAX2Q96IS3 184 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 NACAE9PAV3 2078 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 PSMB2P49721 201 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 PIK3CD-AS1Q5SR53 167 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 CFAP126Q5VTH2 177 aa17.03■□□□□ 0.32
NDEL1-201ENST00000334527 UBE2D3P61077 147 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms