RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MIFP14174 115 aa11.76□□□□□ -0.53
SHOX-201ENST00000334060 S100A4P26447 101 aaKnown RBP11.76□□□□□ -0.53
SHOX-201ENST00000334060 C16orf74Q96GX8 76 aa11.76□□□□□ -0.53
SHOX-201ENST00000334060 TRGV11A0A075B6L2 103 aa11.75□□□□□ -0.53
SHOX-201ENST00000334060 M0R381 172 aa11.75□□□□□ -0.53
SHOX-201ENST00000334060 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
SHOX-201ENST00000334060 ZMAT4Q9H898 229 aa11.75□□□□□ -0.53
SHOX-201ENST00000334060 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
SHOX-201ENST00000334060 TRGV1A0A0A0MS02 117 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 GAGE7O76087 117 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 NUDT3O95989 172 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 DEFB130BP0DP73 79 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 DEFB130AP0DP74 79 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 MPV17L2Q567V2 206 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 POM121L12Q8N7R1 296 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 DKK2Q9UBU2 259 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 IGHV3-53P01767 116 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
SHOX-201ENST00000334060 ZNF415Q09FC8 603 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 KIAA1644Q3SXP7 199 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 FAM19A2Q8N3H0 131 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
SHOX-201ENST00000334060 NACAE9PAV3 2078 aa11.73□□□□□ -0.53
SHOX-201ENST00000334060 SYS1-DBNDD2H3BUS1 97 aa11.73□□□□□ -0.53
SHOX-201ENST00000334060 SNAI2O43623 268 aa11.73□□□□□ -0.53
SHOX-201ENST00000334060 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
SHOX-201ENST00000334060 STARD9Q9P2P6 4700 aa11.73□□□□□ -0.53
SHOX-201ENST00000334060 A6NDN8 102 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 SMIM9A6NGZ8 99 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 CT83Q5H943 113 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 AMMECR1LQ6DCA0 310 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 IGHV3-73A0A0B4J1V6 119 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 ZNF876PQ49A33 203 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 OR5A1Q8NGJ0 315 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
SHOX-201ENST00000334060 DNAH7Q8WXX0 4024 aa11.71□□□□□ -0.53
SHOX-201ENST00000334060 A8MWL6 223 aa11.71□□□□□ -0.53
SHOX-201ENST00000334060 C12orf74Q32Q52 190 aa11.71□□□□□ -0.53
SHOX-201ENST00000334060 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.53
SHOX-201ENST00000334060 EDA2RQ9HAV5 297 aa11.71□□□□□ -0.53
SHOX-201ENST00000334060 A0A087WWL8 130 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 H3BRM9 83 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 SLAQ13239 276 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 ZNF493Q6ZR52 646 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 SPATA12Q7Z6I5 190 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 ATOH7Q8N100 152 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 PHLDA3Q9Y5J5 127 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
SHOX-201ENST00000334060 Q6ZTC4 211 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 ZNF479Q96JC4 524 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 Q9UF83 564 aa11.7□□□□□ -0.54
SHOX-201ENST00000334060 TMEM238LA0A1B0GVL6 79 aa11.69□□□□□ -0.54
SHOX-201ENST00000334060 GFRA4Q9GZZ7 299 aa11.69□□□□□ -0.54
SHOX-201ENST00000334060 C11orf68Q9H3H3 251 aaKnown RBP11.69□□□□□ -0.54
SHOX-201ENST00000334060 U3KQK5 164 aa11.69□□□□□ -0.54
SHOX-201ENST00000334060 A0A1B0GXF2 115 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 M0R2P5 195 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 SIVA1O15304 175 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 UFSP1Q6NVU6 142 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 Q6ZSN1 163 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 COX8AP10176 69 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 EVI2AP22794 236 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 HBBP68871 147 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 MAJINQ3KP22 176 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
SHOX-201ENST00000334060 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 Q6ZVH6 145 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
SHOX-201ENST00000334060 RASL10AQ92737 203 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 LYSTQ99698 3801 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 NXPH4O95158 308 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 FAM74A4Q5TZK3 123 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
SHOX-201ENST00000334060 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
SHOX-201ENST00000334060 HTN3P15516 51 aa11.66□□□□□ -0.54
SHOX-201ENST00000334060 CAMPP49913 170 aa11.66□□□□□ -0.54
SHOX-201ENST00000334060 TWIST1Q15672 202 aa11.66□□□□□ -0.54
SHOX-201ENST00000334060 CNFNQ9BYD5 112 aa11.66□□□□□ -0.54
SHOX-201ENST00000334060 CRYGDP07320 174 aa11.65□□□□□ -0.54
SHOX-201ENST00000334060 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
SHOX-201ENST00000334060 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
SHOX-201ENST00000334060 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
SHOX-201ENST00000334060 SPXQ9BT56 116 aa11.65□□□□□ -0.54
SHOX-201ENST00000334060 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.55
SHOX-201ENST00000334060 K7EP34 96 aa11.65□□□□□ -0.55
SHOX-201ENST00000334060 MED14OSP0DP75 135 aa11.65□□□□□ -0.55
SHOX-201ENST00000334060 LINC01545Q5VT33 79 aa11.65□□□□□ -0.55
SHOX-201ENST00000334060 C11orf45Q8TAV5 145 aa11.65□□□□□ -0.55
SHOX-201ENST00000334060 PLECQ15149 4684 aaKnown RBP11.64□□□□□ -0.55
SHOX-201ENST00000334060 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms