RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 SUMO4Q6EEV6 95 aa6.4□□□□□ -1.39
LSAMP-201ENST00000333617 TEP1Q99973 2627 aaKnown RBP6.39□□□□□ -1.39
LSAMP-201ENST00000333617 F5H697 171 aa6.39□□□□□ -1.39
LSAMP-201ENST00000333617 PROK1P58294 105 aa6.39□□□□□ -1.39
LSAMP-201ENST00000333617 ZNF876PQ49A33 203 aa6.39□□□□□ -1.39
LSAMP-201ENST00000333617 LINC00482Q8N8I6 264 aa6.39□□□□□ -1.39
LSAMP-201ENST00000333617 CLUHP3Q96NS8 147 aa6.39□□□□□ -1.39
LSAMP-201ENST00000333617 VWFP04275 2813 aa6.39□□□□□ -1.39
LSAMP-201ENST00000333617 TENM1Q9UKZ4 2725 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 INSP01308 110 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 PRSS1P07477 247 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 HTN1P15515 57 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 ZNF56Q15929 161 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 NSUN5P1Q3KNT7 163 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 ODF3L2Q3SX64 289 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 FAM74A4Q5TZK3 123 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 CSTL1Q9H114 145 aa6.38□□□□□ -1.39
LSAMP-201ENST00000333617 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
LSAMP-201ENST00000333617 OR11H12B2RN74 326 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 SAP30O75446 220 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 CRYGDP07320 174 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 CMC4P56277 68 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-201ENST00000333617 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
LSAMP-201ENST00000333617 ODF1Q14990 250 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 STHQ8IWL8 128 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 DKK2Q9UBU2 259 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 ATRQ13535 2644 aa6.37□□□□□ -1.39
LSAMP-201ENST00000333617 A0A1B0GV90 55 aa6.36□□□□□ -1.39
LSAMP-201ENST00000333617 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
LSAMP-201ENST00000333617 BATFQ16520 125 aa6.36□□□□□ -1.39
LSAMP-201ENST00000333617 TOMM6Q96B49 74 aa6.36□□□□□ -1.39
LSAMP-201ENST00000333617 LINC01587Q99440 93 aa6.36□□□□□ -1.39
LSAMP-201ENST00000333617 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
LSAMP-201ENST00000333617 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-201ENST00000333617 M0R2P5 195 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 VCYO14598 125 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 COX8AP10176 69 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 G0S2P27469 103 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
LSAMP-201ENST00000333617 TRPT1Q86TN4 253 aaKnown RBP6.35□□□□□ -1.39
LSAMP-201ENST00000333617 LINC00469Q8N7U9 141 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 SCGB3A1Q96QR1 104 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 ZMAT4Q9H898 229 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 SDHAF1A6NFY7 115 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 M0QY20 66 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 DPM2O94777 84 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 IGLV1-51P01701 117 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 NUTF2P61970 127 aaKnown RBP6.35□□□□□ -1.39
LSAMP-201ENST00000333617 C2orf66Q6UXQ4 117 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 NEGR1Q7Z3B1 354 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 NDUFA11Q86Y39 141 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 STPG4Q8N801 248 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 PTH2Q96A98 100 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 KIR2DL4Q99706 377 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 XCL2Q9UBD3 114 aa6.35□□□□□ -1.39
LSAMP-201ENST00000333617 A0A087WX48 190 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 TRBV27A0A0K0K1C4 114 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 LINC01549A6NIU2 74 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 A8MWV9 139 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 IGKCP01834 107 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 PRM2P04554 102 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 KRTAP10-3P60369 221 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 PIK3CD-AS1Q5SR53 167 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 MORN3Q6PF18 240 aaPredicted RBP6.34□□□□□ -1.39
LSAMP-201ENST00000333617 ZFP2Q6ZN57 461 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 TMEM208Q9BTX3 173 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 X6R8D5 127 aa6.34□□□□□ -1.39
LSAMP-201ENST00000333617 H7C1H1 209 aa6.33□□□□□ -1.4
LSAMP-201ENST00000333617 HINT1P49773 126 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-201ENST00000333617 COL5A1-AS1Q5SY13 56 aa6.33□□□□□ -1.4
LSAMP-201ENST00000333617 C11orf72Q8NBR9 251 aa6.33□□□□□ -1.4
LSAMP-201ENST00000333617 FAM110AQ9BQ89 295 aa6.33□□□□□ -1.4
LSAMP-201ENST00000333617 SPXQ9BT56 116 aa6.33□□□□□ -1.4
LSAMP-201ENST00000333617 MRPL35Q9NZE8 188 aaKnown RBP6.33□□□□□ -1.4
LSAMP-201ENST00000333617 F8P00451 2351 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 PLNP26678 52 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 TCTAP57738 103 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 BEAN1Q3B7T3 259 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 ERASQ7Z444 233 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 EDA2RQ9HAV5 297 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 HHLA3Q9XRX5 114 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
LSAMP-201ENST00000333617 IGHV3-73A0A0B4J1V6 119 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 F8VRH5 84 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 FGF6P10767 208 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 NMUP48645 174 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 RIPPLY3P57055 190 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 C1orf158Q8N1D5 194 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 BAALCQ8WXS3 180 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 CHTOPQ9Y3Y2 248 aaKnown RBP6.31□□□□□ -1.4
LSAMP-201ENST00000333617 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms