RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 FHL2Q14192 279 aa8.54□□□□□ -1.04
TRIM49B-201ENST00000332682 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
TRIM49B-201ENST00000332682 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
TRIM49B-201ENST00000332682 TRGV4A0A0C4DH28 118 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 SERF1AO75920 110 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 SLC25A29Q8N8R3 303 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 NIT2Q9NQR4 276 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 Q9UF83 564 aa8.53□□□□□ -1.04
TRIM49B-201ENST00000332682 COL7A1Q02388 2944 aa8.52□□□□□ -1.05
TRIM49B-201ENST00000332682 LOC389332A0A1B0GUA5 103 aa8.52□□□□□ -1.05
TRIM49B-201ENST00000332682 K7EQD1 137 aa8.52□□□□□ -1.05
TRIM49B-201ENST00000332682 HOXA5P20719 270 aa8.52□□□□□ -1.05
TRIM49B-201ENST00000332682 IFI27P40305 119 aaPredicted RBP8.52□□□□□ -1.05
TRIM49B-201ENST00000332682 PRKDCP78527 4128 aaKnown RBP8.52□□□□□ -1.05
TRIM49B-201ENST00000332682 IGLV2-18A0A075B6J9 118 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 TRBV10-1A0A0K0K1A3 114 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 TRBV6-4A0A1B0GX49 114 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 C5orf52A6NGY3 159 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 NUPR1O60356 82 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 ATP5G1P05496 136 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 SNRPEP62304 92 aaKnown RBP8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 NEXN-AS1Q8NBZ9 246 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
TRIM49B-201ENST00000332682 STAB2Q8WWQ8 2551 aa8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 RPL32P62910 135 aaKnown RBP8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 RNASEKQ6P5S7 137 aaKnown RBP8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 NIT1Q86X76 327 aa8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 PRSS3P2Q8NHM4 247 aa8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 TMEM70Q9BUB7 260 aa8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
TRIM49B-201ENST00000332682 LINC00614P0C842 121 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 ESDP10768 282 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 PMCHP20382 165 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 POLR2KP53803 58 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 RHOHQ15669 191 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 FA2HQ7L5A8 372 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 Q8N8P6 123 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 C11orf45Q8TAV5 145 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 DNAJC30Q96LL9 226 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 HHLA3Q9XRX5 114 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 NHLRC4P0CG21 123 aaPredicted RBP8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 CRYBA4P53673 196 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 NANOS2P60321 138 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 Q6ZTC4 211 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 PRO0255Q9UI72 69 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
TRIM49B-201ENST00000332682 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 LOC100131303A0A0U1RQF7 123 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 F5H768 121 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 HTN3P15516 51 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 HIST3H2BBQ8N257 126 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 PRADC1Q9BSG0 188 aa8.48□□□□□ -1.05
TRIM49B-201ENST00000332682 GAGE12JA6NER3 117 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 VCYO14598 125 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 HSBP1O75506 76 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 GAGE1Q13065 139 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 GAGE4Q13068 117 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 GAGE5Q13069 117 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 VSIG2Q96IQ7 327 aa8.47□□□□□ -1.05
TRIM49B-201ENST00000332682 IFITM10A6NMD0 228 aa8.46□□□□□ -1.05
TRIM49B-201ENST00000332682 TCAPO15273 167 aa8.46□□□□□ -1.05
TRIM49B-201ENST00000332682 PAX4O43316 350 aa8.46□□□□□ -1.05
TRIM49B-201ENST00000332682 UBE2D3P61077 147 aa8.46□□□□□ -1.05
TRIM49B-201ENST00000332682 UBE2D2P62837 147 aa8.46□□□□□ -1.05
TRIM49B-201ENST00000332682 FBN3Q75N90 2809 aa8.46□□□□□ -1.06
TRIM49B-201ENST00000332682 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 IGHV1-24A0A0C4DH33 117 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 A0A0J9YY99 117 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 I3L3M4 83 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 K7EMI3 77 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 TSHBP01222 138 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 GYPEP15421 78 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 FAM19A2Q8N3H0 131 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 DEFB104AQ8WTQ1 72 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 KIR2DL4Q99706 377 aa8.45□□□□□ -1.06
TRIM49B-201ENST00000332682 A0A096LNJ9 63 aa8.44□□□□□ -1.06
TRIM49B-201ENST00000332682 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
TRIM49B-201ENST00000332682 AMTP48728 403 aa8.44□□□□□ -1.06
TRIM49B-201ENST00000332682 LAGE3Q14657 143 aa8.44□□□□□ -1.06
TRIM49B-201ENST00000332682 PHLDA1Q8WV24 401 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms