RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 NOTCH2Q04721 2471 aa8.17□□□□□ -1.1
CLN8-201ENST00000331222 DNAJC9-AS1A6NH13 148 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 MP68P56378 58 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 B9D2Q9BPU9 175 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 CEP350Q5VT06 3117 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 B5MCH6 92 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 PSMB8P28062 276 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 HERV-K104P63124 156 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 LINC00311Q8N616 119 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 MPLKIPQ8TAP9 179 aa8.16□□□□□ -1.1
CLN8-201ENST00000331222 WI2-2373I1.2A0A1W2PRP0 233 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 IGHV4-30-4P0DP06 118 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 RSPO1Q2MKA7 263 aaPredicted RBP8.15□□□□□ -1.1
CLN8-201ENST00000331222 SCXQ7RTU7 201 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 IGKV1D-37A0A075B6S9 117 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 MLST8Q9BVC4 326 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
CLN8-201ENST00000331222 TP53TG3Q9ULZ0 132 aa8.15□□□□□ -1.11
CLN8-201ENST00000331222 PIP4P1Q86T03 277 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 C11orf52Q96A22 123 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 A4D1N5 150 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 CRYGDP07320 174 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 WFDC10BQ8IUB3 73 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 C4orf3Q8WVX3 66 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 TMEM190Q8WZ59 177 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 LY6G6CO95867 125 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 Q8N9W7 124 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 LINC00482Q8N8I6 264 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 PRRC2AP48634 2157 aaKnown RBP8.14□□□□□ -1.11
CLN8-201ENST00000331222 CFPP27918 469 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 MIR7-3HGQ8N6C7 128 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
CLN8-201ENST00000331222 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
CLN8-201ENST00000331222 FAM19A5Q7Z5A7 132 aaPredicted RBP8.13□□□□□ -1.11
CLN8-201ENST00000331222 LYPD6Q86Y78 171 aa8.13□□□□□ -1.11
CLN8-201ENST00000331222 C16orf54Q6UWD8 224 aa8.13□□□□□ -1.11
CLN8-201ENST00000331222 H3BUA1 57 aa8.13□□□□□ -1.11
CLN8-201ENST00000331222 UNQ9165/PRO28630Q6UXU0 137 aa8.13□□□□□ -1.11
CLN8-201ENST00000331222 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
CLN8-201ENST00000331222 C10orf105Q8TEF2 133 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 C11orf53Q8IXP5 236 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 DCANP1Q8TF63 244 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 TMEM263Q8WUH6 116 aaKnown RBP8.12□□□□□ -1.11
CLN8-201ENST00000331222 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 PPDPFQ9H3Y8 114 aa8.12□□□□□ -1.11
CLN8-201ENST00000331222 MYO18BQ8IUG5 2567 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 K7EIM0 57 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 I3L2K1 104 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 E7EUB6 86 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 Q8NFD4 153 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 SLX1AQ9BQ83 275 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 FGF23Q9GZV9 251 aaPredicted RBP8.11□□□□□ -1.11
CLN8-201ENST00000331222 UBE2D4Q9Y2X8 147 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 AGRNO00468 2067 aa8.11□□□□□ -1.11
CLN8-201ENST00000331222 LGALS9O00182 355 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 WISP2O76076 250 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 UBE2D1P51668 147 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 PIEZO2Q9H5I5 2752 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 DEFB131BA0A096LNP1 70 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 ADAMTS20P59510 1910 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 SLPIP03973 132 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 BRK1Q8WUW1 75 aa8.1□□□□□ -1.11
CLN8-201ENST00000331222 ZNF747Q9BV97 191 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 COL5A1P20908 1838 aaPredicted RBP8.09□□□□□ -1.11
CLN8-201ENST00000331222 Q6ZUT4 128 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 A0A0B4J2C4 111 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 PLA2G2EQ9NZK7 142 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 KAAG1Q9UBP8 84 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 TECTAO75443 2155 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
CLN8-201ENST00000331222 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.12
CLN8-201ENST00000331222 COL4A3Q01955 1670 aa8.08□□□□□ -1.12
CLN8-201ENST00000331222 PLA2G5P39877 138 aa8.08□□□□□ -1.12
CLN8-201ENST00000331222 TDRG1Q3Y452 100 aa8.08□□□□□ -1.12
CLN8-201ENST00000331222 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
CLN8-201ENST00000331222 LINC01548A6NM66 108 aa8.08□□□□□ -1.12
CLN8-201ENST00000331222 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
CLN8-201ENST00000331222 NFE4Q86UQ8 179 aa8.07□□□□□ -1.12
CLN8-201ENST00000331222 MAP6D1Q9H9H5 199 aa8.07□□□□□ -1.12
CLN8-201ENST00000331222 WFDC2Q14508 124 aa8.07□□□□□ -1.12
CLN8-201ENST00000331222 C1orf147Q96MC9 270 aaPredicted RBP8.07□□□□□ -1.12
CLN8-201ENST00000331222 C20orf144Q9BQM9 153 aa8.07□□□□□ -1.12
CLN8-201ENST00000331222 C19orf84I3L1E1 186 aa8.07□□□□□ -1.12
CLN8-201ENST00000331222 NAV3Q8IVL0 2385 aa8.07□□□□□ -1.12
CLN8-201ENST00000331222 IGLV9-49A0A0B4J1Y8 123 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 COX7BP24311 80 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 Q6ZTI0 123 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 IGKV2-28A0A075B6P5 120 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 IGKV2D-28P01615 120 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 Q8N7P7 452 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 ALPK3Q96L96 1907 aa8.06□□□□□ -1.12
CLN8-201ENST00000331222 CRYGBP07316 175 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms