RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 K7EQG2 157 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 HIST1H4GQ99525 98 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 MDFICQ9P1T7 246 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 KRTAP24-1Q3LI83 254 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
PDGFB-201ENST00000331163 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
PDGFB-201ENST00000331163 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
PDGFB-201ENST00000331163 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
PDGFB-201ENST00000331163 J3QR89 54 aa11.82□□□□□ -0.52
PDGFB-201ENST00000331163 ZNF479Q96JC4 524 aa11.82□□□□□ -0.52
PDGFB-201ENST00000331163 A0A1B0GWB2 263 aa11.81□□□□□ -0.52
PDGFB-201ENST00000331163 INSL3P51460 131 aa11.81□□□□□ -0.52
PDGFB-201ENST00000331163 TMEM89A2RUT3 159 aa11.81□□□□□ -0.52
PDGFB-201ENST00000331163 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
PDGFB-201ENST00000331163 MRPL16Q9NX20 251 aaKnown RBP11.81□□□□□ -0.52
PDGFB-201ENST00000331163 A0A0J9YX75 114 aa11.81□□□□□ -0.52
PDGFB-201ENST00000331163 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
PDGFB-201ENST00000331163 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
PDGFB-201ENST00000331163 SPAG8Q99932 426 aaPredicted RBP11.8□□□□□ -0.52
PDGFB-201ENST00000331163 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
PDGFB-201ENST00000331163 U3KQE9 123 aa11.8□□□□□ -0.52
PDGFB-201ENST00000331163 Q8N1Y9 231 aa11.8□□□□□ -0.52
PDGFB-201ENST00000331163 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
PDGFB-201ENST00000331163 A0A1B0GV72 72 aa11.79□□□□□ -0.52
PDGFB-201ENST00000331163 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
PDGFB-201ENST00000331163 LOC107984156A0A0G2JMH3 177 aa11.79□□□□□ -0.52
PDGFB-201ENST00000331163 CKS1BP61024 79 aa11.79□□□□□ -0.52
PDGFB-201ENST00000331163 ARL17AQ8IVW1 177 aa11.79□□□□□ -0.52
PDGFB-201ENST00000331163 CHTOPQ9Y3Y2 248 aaKnown RBP11.79□□□□□ -0.52
PDGFB-201ENST00000331163 IGKCP01834 107 aa11.78□□□□□ -0.52
PDGFB-201ENST00000331163 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
PDGFB-201ENST00000331163 GAGE7O76087 117 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 GAGE12FP0CL80 117 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 GAGE12GP0CL81 117 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 GAGE12IP0CL82 117 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 FOXI2Q6ZQN5 318 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 ODF3L2Q3SX64 289 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 NDUFA11Q86Y39 141 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 ATP6V0BQ99437 205 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 CYSLTR1Q9Y271 337 aa11.77□□□□□ -0.53
PDGFB-201ENST00000331163 IGHV1OR15-1A0A075B7D0 117 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 A0A096LPF7 62 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 ZFAND2AQ8N6M9 145 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 PHLDA1Q8WV24 401 aaPredicted RBP11.76□□□□□ -0.53
PDGFB-201ENST00000331163 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
PDGFB-201ENST00000331163 LGALS9O00182 355 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 C9orf47Q6ZRZ4 202 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 Q8N2B8 174 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 H3BMM0 161 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 INSP01308 110 aa11.76□□□□□ -0.53
PDGFB-201ENST00000331163 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
PDGFB-201ENST00000331163 GAGE13Q4V321 117 aa11.75□□□□□ -0.53
PDGFB-201ENST00000331163 FAM110AQ9BQ89 295 aa11.75□□□□□ -0.53
PDGFB-201ENST00000331163 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
PDGFB-201ENST00000331163 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
PDGFB-201ENST00000331163 MAPKAPK5-AS1Q8N8E1 139 aa11.74□□□□□ -0.53
PDGFB-201ENST00000331163 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
PDGFB-201ENST00000331163 TRAV26-1A0A087WT03 109 aa11.74□□□□□ -0.53
PDGFB-201ENST00000331163 DPM2O94777 84 aa11.74□□□□□ -0.53
PDGFB-201ENST00000331163 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
PDGFB-201ENST00000331163 IGLL5B9A064 214 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 MYOZ3Q8TDC0 251 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 APOMO95445 188 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 ODF1Q14990 250 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 CEND1Q8N111 149 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 Q6AWC8 147 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 SCGB1D4Q6XE38 83 aa11.73□□□□□ -0.53
PDGFB-201ENST00000331163 A0A1B0GW15 77 aa11.72□□□□□ -0.53
PDGFB-201ENST00000331163 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
PDGFB-201ENST00000331163 C12orf74Q32Q52 190 aa11.72□□□□□ -0.53
PDGFB-201ENST00000331163 SPANXB1Q9NS25 103 aaPredicted RBP11.72□□□□□ -0.53
PDGFB-201ENST00000331163 PSMB2P49721 201 aa11.72□□□□□ -0.53
PDGFB-201ENST00000331163 PTH2Q96A98 100 aa11.72□□□□□ -0.53
PDGFB-201ENST00000331163 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
PDGFB-201ENST00000331163 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
PDGFB-201ENST00000331163 SIVA1O15304 175 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 NDUFA7O95182 113 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 RPL39LQ96EH5 51 aaKnown RBP11.7□□□□□ -0.54
PDGFB-201ENST00000331163 SVIPQ8NHG7 77 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 SOCS3O14543 225 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 P0DMU3 169 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 FAM231AP0DMU4 169 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 FAM231CP0DMU5 169 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
PDGFB-201ENST00000331163 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
PDGFB-201ENST00000331163 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
PDGFB-201ENST00000331163 GEMIN7Q9H840 131 aaKnown RBP11.69□□□□□ -0.54
PDGFB-201ENST00000331163 RBAKDNA6NC62 111 aa11.69□□□□□ -0.54
PDGFB-201ENST00000331163 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
PDGFB-201ENST00000331163 TRGV4A0A0C4DH28 118 aa11.68□□□□□ -0.54
PDGFB-201ENST00000331163 H7C2G1 150 aa11.68□□□□□ -0.54
PDGFB-201ENST00000331163 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
PDGFB-201ENST00000331163 ZNF580Q9UK33 172 aa11.68□□□□□ -0.54
PDGFB-201ENST00000331163 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
PDGFB-201ENST00000331163 CRYBA4P53673 196 aa11.68□□□□□ -0.54
PDGFB-201ENST00000331163 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms