RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TM2D2Q9BX73 214 aa9.61□□□□□ -0.87
CTHRC1-201ENST00000330295 PARLQ9H300 379 aa9.61□□□□□ -0.87
CTHRC1-201ENST00000330295 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
CTHRC1-201ENST00000330295 TIRAPP58753 221 aa9.6□□□□□ -0.87
CTHRC1-201ENST00000330295 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
CTHRC1-201ENST00000330295 DERL1Q9BUN8 251 aa9.6□□□□□ -0.87
CTHRC1-201ENST00000330295 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
CTHRC1-201ENST00000330295 RAB19A4D1S5 217 aa9.59□□□□□ -0.87
CTHRC1-201ENST00000330295 A6NJY4 79 aa9.59□□□□□ -0.87
CTHRC1-201ENST00000330295 FAM74A4Q5TZK3 123 aa9.59□□□□□ -0.87
CTHRC1-201ENST00000330295 SPANXN1Q5VSR9 72 aa9.59□□□□□ -0.87
CTHRC1-201ENST00000330295 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
CTHRC1-201ENST00000330295 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 P01737 135 aa9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 SFRP2Q96HF1 295 aa9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 EIF5A2Q9GZV4 153 aaKnown RBP9.58□□□□□ -0.88
CTHRC1-201ENST00000330295 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
CTHRC1-201ENST00000330295 SMIM17P0DL12 118 aa9.57□□□□□ -0.88
CTHRC1-201ENST00000330295 RPL19P84098 196 aaKnown RBP9.57□□□□□ -0.88
CTHRC1-201ENST00000330295 A0A087WWL8 130 aa9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 TPPP3Q9BW30 176 aa9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 JPT2Q9H910 190 aa9.56□□□□□ -0.88
CTHRC1-201ENST00000330295 A0A087WWC5 75 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 GAGE12JA6NER3 117 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 F2Z2F3 143 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 SNAI2O43623 268 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 GAGE1Q13065 139 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 GAGE4Q13068 117 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 GAGE5Q13069 117 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 LAGE3Q14657 143 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 SAMD10Q9BYL1 202 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 KRTAP4-8Q9BYQ9 185 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 GTSF1LQ9H1H1 148 aa9.55□□□□□ -0.88
CTHRC1-201ENST00000330295 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
CTHRC1-201ENST00000330295 CEBPGP53567 150 aa9.54□□□□□ -0.88
CTHRC1-201ENST00000330295 CACNG7P62955 275 aa9.54□□□□□ -0.88
CTHRC1-201ENST00000330295 UFSP1Q6NVU6 142 aa9.54□□□□□ -0.88
CTHRC1-201ENST00000330295 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
CTHRC1-201ENST00000330295 AP1S3Q96PC3 154 aa9.54□□□□□ -0.88
CTHRC1-201ENST00000330295 C19orf71A6NCJ1 209 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 F5H697 171 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 NDUFS6O75380 124 aaKnown RBP9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 RAB4BP61018 213 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 RPL36AP83881 106 aaKnown RBP9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 ZNF56Q15929 161 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 Q8N3U1 123 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 RPL36ALQ969Q0 106 aaKnown RBP9.53□□□□□ -0.88
CTHRC1-201ENST00000330295 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 IGHV3-30P01768 117 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 IGHV3-33P01772 117 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 IGHV3-30-3P0DP02 117 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 IGHV3-30-5P0DP03 117 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 SSTP61278 116 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 Q8N976 141 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 FAM210AQ96ND0 272 aa9.52□□□□□ -0.89
CTHRC1-201ENST00000330295 MUC21A0A0G2JKD1 596 aa9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 MUC21A0A140T8X8 626 aa9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 C14orf178Q8N769 122 aaPredicted RBP9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 NUDT10Q8NFP7 164 aa9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 NUDT11Q96G61 164 aa9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 RPP21Q9H633 154 aaKnown RBP9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 CRCT1Q9UGL9 99 aa9.51□□□□□ -0.89
CTHRC1-201ENST00000330295 TRGC1P0CF51 173 aa9.5□□□□□ -0.89
CTHRC1-201ENST00000330295 GZMBP10144 247 aa9.5□□□□□ -0.89
CTHRC1-201ENST00000330295 KCNIP4Q6PIL6 250 aa9.5□□□□□ -0.89
CTHRC1-201ENST00000330295 TEX261Q6UWH6 196 aa9.5□□□□□ -0.89
CTHRC1-201ENST00000330295 SMIM7Q9BQ49 75 aa9.5□□□□□ -0.89
CTHRC1-201ENST00000330295 URGCP-MRPS24S4R325 110 aa9.5□□□□□ -0.89
CTHRC1-201ENST00000330295 TRBV7-3A0A075B6L6 115 aa9.49□□□□□ -0.89
CTHRC1-201ENST00000330295 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
CTHRC1-201ENST00000330295 H7C1H1 209 aa9.49□□□□□ -0.89
CTHRC1-201ENST00000330295 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
CTHRC1-201ENST00000330295 IGLC6P0CF74 106 aa9.49□□□□□ -0.89
CTHRC1-201ENST00000330295 WDR73Q6P4I2 378 aa9.49□□□□□ -0.89
CTHRC1-201ENST00000330295 A8MWL6 223 aa9.48□□□□□ -0.89
CTHRC1-201ENST00000330295 PEA15Q15121 130 aa9.48□□□□□ -0.89
CTHRC1-201ENST00000330295 FAM74A3Q4VXF1 159 aa9.48□□□□□ -0.89
CTHRC1-201ENST00000330295 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
CTHRC1-201ENST00000330295 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
CTHRC1-201ENST00000330295 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
CTHRC1-201ENST00000330295 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
CTHRC1-201ENST00000330295 K7EN84 100 aa9.47□□□□□ -0.89
CTHRC1-201ENST00000330295 MGPP08493 103 aa9.47□□□□□ -0.89
CTHRC1-201ENST00000330295 LINC00694P0DN24 101 aa9.47□□□□□ -0.89
CTHRC1-201ENST00000330295 TMEM97Q5BJF2 176 aa9.47□□□□□ -0.89
CTHRC1-201ENST00000330295 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
CTHRC1-201ENST00000330295 BORCS7Q96B45 105 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms