RNA–Protein interactions for RNA: ENST00000327956.6

SCN5A-201, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-201ENST00000327956 FAT1Q14517 4588 aa11.4□□□□□ -0.58
SCN5A-201ENST00000327956 HLA-DQA1P01909 254 aa11.4□□□□□ -0.58
SCN5A-201ENST00000327956 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.58
SCN5A-201ENST00000327956 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
SCN5A-201ENST00000327956 RPL19P84098 196 aaKnown RBP11.4□□□□□ -0.58
SCN5A-201ENST00000327956 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
SCN5A-201ENST00000327956 SSTP61278 116 aa11.39□□□□□ -0.59
SCN5A-201ENST00000327956 MIAQ16674 131 aa11.39□□□□□ -0.59
SCN5A-201ENST00000327956 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
SCN5A-201ENST00000327956 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
SCN5A-201ENST00000327956 TRBV25-1A0A075B6N4 114 aa11.38□□□□□ -0.59
SCN5A-201ENST00000327956 TEX46H3BTG2 121 aa11.38□□□□□ -0.59
SCN5A-201ENST00000327956 H7C1H1 209 aa11.38□□□□□ -0.59
SCN5A-201ENST00000327956 SNAI2O43623 268 aa11.38□□□□□ -0.59
SCN5A-201ENST00000327956 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
SCN5A-201ENST00000327956 MUC21A0A0G2JKD1 596 aa11.37□□□□□ -0.59
SCN5A-201ENST00000327956 MUC21A0A140T8X8 626 aa11.37□□□□□ -0.59
SCN5A-201ENST00000327956 TPPP3Q9BW30 176 aa11.37□□□□□ -0.59
SCN5A-201ENST00000327956 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
SCN5A-201ENST00000327956 hCG_2014768A0A024R1R8 64 aa11.36□□□□□ -0.59
SCN5A-201ENST00000327956 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
SCN5A-201ENST00000327956 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
SCN5A-201ENST00000327956 AKAP14Q86UN6 197 aa11.36□□□□□ -0.59
SCN5A-201ENST00000327956 DERL1Q9BUN8 251 aa11.36□□□□□ -0.59
SCN5A-201ENST00000327956 MLST8Q9BVC4 326 aa11.36□□□□□ -0.59
SCN5A-201ENST00000327956 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
SCN5A-201ENST00000327956 XKRY2A2RUG3 117 aa11.35□□□□□ -0.59
SCN5A-201ENST00000327956 KRTAP29-1A8MX34 341 aaPredicted RBP11.35□□□□□ -0.59
SCN5A-201ENST00000327956 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
SCN5A-201ENST00000327956 MGPP08493 103 aa11.35□□□□□ -0.59
SCN5A-201ENST00000327956 RPL35P42766 123 aaKnown RBP11.35□□□□□ -0.59
SCN5A-201ENST00000327956 MYCBP2O75592 4640 aa11.35□□□□□ -0.59
SCN5A-201ENST00000327956 IGLV2-8P01709 118 aa11.34□□□□□ -0.59
SCN5A-201ENST00000327956 EIF5AL1Q6IS14 154 aaKnown RBP11.34□□□□□ -0.59
SCN5A-201ENST00000327956 CIRBP-AS1Q8TBR5 109 aa11.34□□□□□ -0.59
SCN5A-201ENST00000327956 GNG13Q9P2W3 67 aa11.34□□□□□ -0.59
SCN5A-201ENST00000327956 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
SCN5A-201ENST00000327956 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.6
SCN5A-201ENST00000327956 RAB5CP51148 216 aa11.33□□□□□ -0.6
SCN5A-201ENST00000327956 CACNG7P62955 275 aa11.33□□□□□ -0.6
SCN5A-201ENST00000327956 GAGE6Q13070 117 aa11.33□□□□□ -0.6
SCN5A-201ENST00000327956 DGAT2L7PQ6IED9 249 aa11.33□□□□□ -0.6
SCN5A-201ENST00000327956 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
SCN5A-201ENST00000327956 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
SCN5A-201ENST00000327956 CLPSL2Q6UWE3 100 aa11.32□□□□□ -0.6
SCN5A-201ENST00000327956 SLC51BQ86UW2 128 aa11.32□□□□□ -0.6
SCN5A-201ENST00000327956 OR2D3Q8NGH3 330 aa11.32□□□□□ -0.6
SCN5A-201ENST00000327956 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
SCN5A-201ENST00000327956 IFNA1P01562 189 aa11.31□□□□□ -0.6
SCN5A-201ENST00000327956 GNG4P50150 75 aa11.31□□□□□ -0.6
SCN5A-201ENST00000327956 RBX1P62877 108 aa11.31□□□□□ -0.6
SCN5A-201ENST00000327956 CENPWQ5EE01 88 aa11.31□□□□□ -0.6
SCN5A-201ENST00000327956 LINC00269Q8N2A0 174 aa11.31□□□□□ -0.6
SCN5A-201ENST00000327956 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
SCN5A-201ENST00000327956 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
SCN5A-201ENST00000327956 SULT1A2P50226 295 aa11.3□□□□□ -0.6
SCN5A-201ENST00000327956 CLRN3Q8NCR9 226 aa11.3□□□□□ -0.6
SCN5A-201ENST00000327956 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
SCN5A-201ENST00000327956 A0A1B0GVG6 124 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 F2Z2F3 143 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 UBE2L6O14933 153 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 P01737 135 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 RPL37AP61513 92 aaKnown RBP11.29□□□□□ -0.6
SCN5A-201ENST00000327956 CCL20P78556 96 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 C11orf52Q96A22 123 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 PRR34Q9NV39 138 aa11.29□□□□□ -0.6
SCN5A-201ENST00000327956 PDE6DO43924 150 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 OXTP01178 125 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 REG3AQ06141 175 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 NTM-AS1Q6ZSK4 140 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
SCN5A-201ENST00000327956 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.61
SCN5A-201ENST00000327956 PRSS1P07477 247 aa11.27□□□□□ -0.61
SCN5A-201ENST00000327956 GZMBP10144 247 aa11.27□□□□□ -0.61
SCN5A-201ENST00000327956 SUMO4Q6EEV6 95 aa11.27□□□□□ -0.61
SCN5A-201ENST00000327956 WDR73Q6P4I2 378 aa11.27□□□□□ -0.61
SCN5A-201ENST00000327956 RASL11AQ6T310 242 aa11.27□□□□□ -0.61
SCN5A-201ENST00000327956 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
SCN5A-201ENST00000327956 M0QY20 66 aa11.26□□□□□ -0.61
SCN5A-201ENST00000327956 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
SCN5A-201ENST00000327956 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
SCN5A-201ENST00000327956 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
SCN5A-201ENST00000327956 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
SCN5A-201ENST00000327956 MED9Q9NWA0 146 aa11.26□□□□□ -0.61
SCN5A-201ENST00000327956 IGLV10-54A0A075B6I4 117 aa11.25□□□□□ -0.61
SCN5A-201ENST00000327956 hDV102S1A0JD36 115 aa11.25□□□□□ -0.61
SCN5A-201ENST00000327956 C9orf163Q8N9P6 203 aa11.25□□□□□ -0.61
SCN5A-201ENST00000327956 COTL1Q14019 142 aa11.24□□□□□ -0.61
SCN5A-201ENST00000327956 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
SCN5A-201ENST00000327956 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
SCN5A-201ENST00000327956 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
SCN5A-201ENST00000327956 AMTP48728 403 aa11.23□□□□□ -0.61
SCN5A-201ENST00000327956 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
SCN5A-201ENST00000327956 RAB19A4D1S5 217 aa11.22□□□□□ -0.61
SCN5A-201ENST00000327956 C19orf71A6NCJ1 209 aa11.22□□□□□ -0.61
SCN5A-201ENST00000327956 TAGLN2P37802 199 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms