RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
SMAD3-201ENST00000327367 CASC2Q6XLA1 102 aa12.57□□□□□ -0.4
SMAD3-201ENST00000327367 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
SMAD3-201ENST00000327367 C20orf203Q8NBC4 194 aa12.56□□□□□ -0.4
SMAD3-201ENST00000327367 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
SMAD3-201ENST00000327367 CENPVL3A0A0U1RRI6 287 aa12.56□□□□□ -0.4
SMAD3-201ENST00000327367 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
SMAD3-201ENST00000327367 GRNP28799 593 aaKnown RBP12.55□□□□□ -0.4
SMAD3-201ENST00000327367 H3BUA1 57 aa12.55□□□□□ -0.4
SMAD3-201ENST00000327367 WT1P19544 449 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-201ENST00000327367 DCANP1Q8TF63 244 aa12.55□□□□□ -0.4
SMAD3-201ENST00000327367 TSC2P49815 1807 aa12.54□□□□□ -0.4
SMAD3-201ENST00000327367 F8W735 103 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-201ENST00000327367 C3orf84H3BNL1 204 aa12.54□□□□□ -0.4
SMAD3-201ENST00000327367 ZFAND3Q9H8U3 227 aa12.53□□□□□ -0.4
SMAD3-201ENST00000327367 FAM215AQ9Y5M1 114 aa12.53□□□□□ -0.4
SMAD3-201ENST00000327367 A8MZ25 164 aa12.52□□□□□ -0.4
SMAD3-201ENST00000327367 NEXN-AS1Q8NBZ9 246 aa12.52□□□□□ -0.4
SMAD3-201ENST00000327367 WDR90Q96KV7 1748 aa12.52□□□□□ -0.41
SMAD3-201ENST00000327367 NCKAP5O14513 1909 aa12.52□□□□□ -0.41
SMAD3-201ENST00000327367 POM121L12Q8N7R1 296 aa12.52□□□□□ -0.41
SMAD3-201ENST00000327367 KAAG1Q9UBP8 84 aa12.52□□□□□ -0.41
SMAD3-201ENST00000327367 SERP2Q8N6R1 65 aa12.52□□□□□ -0.41
SMAD3-201ENST00000327367 ROS1P08922 2347 aa12.51□□□□□ -0.41
SMAD3-201ENST00000327367 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
SMAD3-201ENST00000327367 OBSL1O75147 1896 aa12.51□□□□□ -0.41
SMAD3-201ENST00000327367 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
SMAD3-201ENST00000327367 PLXNA3P51805 1871 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 C11orf1Q9H5F2 150 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 TRBV27A0A0K0K1C4 114 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 TMEM223A0PJW6 202 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 UNQ9165/PRO28630Q6UXU0 137 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 LINC00467Q9BRT7 94 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 VWA8A3KMH1 1905 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 HIGD2AQ9BW72 106 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 IGKV2-24A0A0C4DH68 120 aa12.5□□□□□ -0.41
SMAD3-201ENST00000327367 ODF3L1Q8IXM7 274 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 PKDREJQ9NTG1 2253 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 SIP14410 1827 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 PDE6GP18545 87 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 USF3Q68DE3 2245 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 Q8N9W7 124 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 CDKN2A-AS1Q9UH64 79 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 IGHV4-31P0DP07 118 aa12.49□□□□□ -0.41
SMAD3-201ENST00000327367 WNK2Q9Y3S1 2297 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 LY6G6EA0A0G2JKS1 128 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 U3KQA8 63 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 COX7CP15954 63 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 C2orf91Q6ZV80 131 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 THSD7AQ9UPZ6 1657 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 C1orf158Q8N1D5 194 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 RETNQ9HD89 108 aa12.48□□□□□ -0.41
SMAD3-201ENST00000327367 LINC00308Q8TCZ7 52 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
SMAD3-201ENST00000327367 C5orf56Q8N8D9 126 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 IGKV1D-37A0A075B6S9 117 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 IGF1P05019 195 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
SMAD3-201ENST00000327367 GTF3C1Q12789 2109 aa12.46□□□□□ -0.41
SMAD3-201ENST00000327367 ZNF22P17026 224 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-201ENST00000327367 C22orf34Q6ZV56 151 aa12.46□□□□□ -0.41
SMAD3-201ENST00000327367 WFDC13Q8IUB5 93 aa12.46□□□□□ -0.41
SMAD3-201ENST00000327367 MED14OSP0DP75 135 aa12.46□□□□□ -0.41
SMAD3-201ENST00000327367 CCL18P55774 89 aa12.46□□□□□ -0.42
SMAD3-201ENST00000327367 ZFAND2AQ8N6M9 145 aa12.46□□□□□ -0.42
SMAD3-201ENST00000327367 NOTCH3Q9UM47 2321 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 TRBV30A0A0K0K1B3 111 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 LRRC75A-AS1Q8N1F1 130 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 SMIM9A6NGZ8 99 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 TRIOBPQ9H2D6 2365 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 J3QLI3 93 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 MBD6Q96DN6 1003 aa12.45□□□□□ -0.42
SMAD3-201ENST00000327367 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
SMAD3-201ENST00000327367 KRTAP27-1Q3LI81 207 aa12.44□□□□□ -0.42
SMAD3-201ENST00000327367 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
SMAD3-201ENST00000327367 PCNX2A6NKB5 2137 aa12.44□□□□□ -0.42
SMAD3-201ENST00000327367 ATP5EP2Q5VTU8 51 aa12.43□□□□□ -0.42
SMAD3-201ENST00000327367 CCKP06307 115 aa12.43□□□□□ -0.42
SMAD3-201ENST00000327367 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
SMAD3-201ENST00000327367 IGLV4-3A0A075B6K6 122 aa12.42□□□□□ -0.42
SMAD3-201ENST00000327367 Q6Q795 121 aa12.42□□□□□ -0.42
SMAD3-201ENST00000327367 PROK1P58294 105 aa12.42□□□□□ -0.42
SMAD3-201ENST00000327367 PMAIP1Q13794 54 aa12.42□□□□□ -0.42
SMAD3-201ENST00000327367 B9D2Q9BPU9 175 aa12.42□□□□□ -0.42
SMAD3-201ENST00000327367 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
SMAD3-201ENST00000327367 K7ERS5 55 aa12.41□□□□□ -0.42
SMAD3-201ENST00000327367 XAGE1AQ9HD64 81 aa12.41□□□□□ -0.42
SMAD3-201ENST00000327367 PRR15LQ9BU68 103 aa12.41□□□□□ -0.42
SMAD3-201ENST00000327367 FAM19A1Q7Z5A9 133 aa12.41□□□□□ -0.42
SMAD3-201ENST00000327367 EP300Q09472 2414 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-201ENST00000327367 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms