RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 DEFB131AP59861 70 aa13.48□□□□□ -0.25
SHISA3-201ENST00000319234 VPS25Q9BRG1 176 aa13.48□□□□□ -0.25
SHISA3-201ENST00000319234 PRSS29PA6NIE9 313 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 VCYO14598 125 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 PAPPA-AS1Q5QFB9 102 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 AMTNQ6UX39 209 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 TRBV7-3A0A075B6L6 115 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 CD7P09564 240 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 SUMO4Q6EEV6 95 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 NEGR1Q7Z3B1 354 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 C9orf85Q96MD7 179 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 HIST1H4GQ99525 98 aa13.47□□□□□ -0.25
SHISA3-201ENST00000319234 TRAV12-2A0A075B6T6 113 aa13.46□□□□□ -0.25
SHISA3-201ENST00000319234 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
SHISA3-201ENST00000319234 KNCNA6PVL3 124 aa13.46□□□□□ -0.25
SHISA3-201ENST00000319234 SPINK13Q1W4C9 94 aa13.46□□□□□ -0.25
SHISA3-201ENST00000319234 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.25
SHISA3-201ENST00000319234 TRAV25A0A0B4J276 109 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 A8MTW9 85 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 K7ERJ3 54 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 TMEM141Q96I45 108 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 KIR2DL4Q99706 377 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 ZFP2Q6ZN57 461 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 SYT8Q8NBV8 401 aa13.45□□□□□ -0.26
SHISA3-201ENST00000319234 SPAG8Q99932 426 aaPredicted RBP13.45□□□□□ -0.26
SHISA3-201ENST00000319234 IGHV3-16A0A0C4DH30 117 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 A0A1B0GWB2 263 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 CYSRT1A8MQ03 144 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 H3BMM0 161 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 RIPPLY3P57055 190 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 C12orf74Q32Q52 190 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 TIMM17AQ99595 171 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 MAP6D1Q9H9H5 199 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 HECTD1Q9ULT8 2610 aa13.44□□□□□ -0.26
SHISA3-201ENST00000319234 IGIPA6NJ69 53 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 IGLL5B9A064 214 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 PROK1P58294 105 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 PRADC1Q9BSG0 188 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 TP53TG1Q9Y2A0 90 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 IGHV1OR15-1A0A075B7D0 117 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 TRBV27A0A0K0K1C4 114 aa13.43□□□□□ -0.26
SHISA3-201ENST00000319234 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
SHISA3-201ENST00000319234 F5H697 171 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 CRYGDP07320 174 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 HERVK_113P61574 105 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 PMVKQ15126 192 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 JPT2Q9H910 190 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 A0A087WWL8 130 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 SDHAF1A6NFY7 115 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 G3V4G9 280 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 TSHBP01222 138 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 C21orf62-AS1Q17RA5 79 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 ZNF479Q96JC4 524 aa13.41□□□□□ -0.26
SHISA3-201ENST00000319234 FLNBO75369 2602 aaKnown RBP13.4□□□□□ -0.26
SHISA3-201ENST00000319234 HIVEP2P31629 2446 aa13.4□□□□□ -0.26
SHISA3-201ENST00000319234 SAP30O75446 220 aa13.4□□□□□ -0.26
SHISA3-201ENST00000319234 AGRNO00468 2067 aa13.4□□□□□ -0.26
SHISA3-201ENST00000319234 IGLV4-69A0A075B6H9 119 aa13.4□□□□□ -0.27
SHISA3-201ENST00000319234 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.27
SHISA3-201ENST00000319234 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.27
SHISA3-201ENST00000319234 ADARB2-AS1A8MUL3 147 aa13.4□□□□□ -0.27
SHISA3-201ENST00000319234 INAFM1C9JVW0 142 aa13.4□□□□□ -0.27
SHISA3-201ENST00000319234 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.27
SHISA3-201ENST00000319234 ZNF815PA8K554 130 aa13.39□□□□□ -0.27
SHISA3-201ENST00000319234 RHOHQ15669 191 aa13.39□□□□□ -0.27
SHISA3-201ENST00000319234 Q8N1Y9 231 aa13.39□□□□□ -0.27
SHISA3-201ENST00000319234 SETXQ7Z333 2677 aaKnown RBP13.39□□□□□ -0.27
SHISA3-201ENST00000319234 TMEM238LA0A1B0GVL6 79 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 A6NJY4 79 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 MDFICQ9P1T7 246 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 CUBNO60494 3623 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 NSUN5P1Q3KNT7 163 aa13.38□□□□□ -0.27
SHISA3-201ENST00000319234 TRPT1Q86TN4 253 aaKnown RBP13.38□□□□□ -0.27
SHISA3-201ENST00000319234 TRGV11A0A075B6L2 103 aa13.37□□□□□ -0.27
SHISA3-201ENST00000319234 M0QY20 66 aa13.37□□□□□ -0.27
SHISA3-201ENST00000319234 MTORP42345 2549 aa13.37□□□□□ -0.27
SHISA3-201ENST00000319234 F8W1H4 67 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 RBMY1A1P0DJD3 496 aaKnown RBP13.36□□□□□ -0.27
SHISA3-201ENST00000319234 RBMY1CP0DJD4 496 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 RBMY1FQ15415 496 aaKnown RBP13.36□□□□□ -0.27
SHISA3-201ENST00000319234 ZNF56Q15929 161 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 CLUHP3Q96NS8 147 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 SORL1Q92673 2214 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 ZNF876PQ49A33 203 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 FAM74A4Q5TZK3 123 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 SCGB1D4Q6XE38 83 aa13.36□□□□□ -0.27
SHISA3-201ENST00000319234 RPL39P62891 51 aaKnown RBP13.35□□□□□ -0.27
SHISA3-201ENST00000319234 MORN3Q6PF18 240 aaPredicted RBP13.34□□□□□ -0.27
SHISA3-201ENST00000319234 KRTAP10-3P60369 221 aa13.34□□□□□ -0.27
SHISA3-201ENST00000319234 COTL1Q14019 142 aa13.34□□□□□ -0.27
SHISA3-201ENST00000319234 NDUFA11Q86Y39 141 aa13.34□□□□□ -0.27
SHISA3-201ENST00000319234 EDA2RQ9HAV5 297 aa13.34□□□□□ -0.27
SHISA3-201ENST00000319234 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
SHISA3-201ENST00000319234 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
SHISA3-201ENST00000319234 SRSF9Q13242 221 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHISA3-201ENST00000319234 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
SHISA3-201ENST00000319234 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms