RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
TMEM39A-201ENST00000319172 LINC00158P58513 81 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 SFTA2Q6UW10 78 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 A0A0J9YY99 117 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 SMIM13P0DJ93 91 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 HILS1P60008 231 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 TEX43Q6ZNM6 134 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 MRPS16Q9Y3D3 137 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 I3L3M4 83 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 TDRG1Q3Y452 100 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 SUMO4Q6EEV6 95 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 HLA-DRB4X5D2U9 266 aa6.98□□□□□ -1.29
TMEM39A-201ENST00000319172 IGLL1P15814 213 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 PRR9Q5T870 116 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 H3BMM0 161 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 DEFB125Q8N687 156 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 C11orf21Q9P2W6 132 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 IGLC6P0CF74 106 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 FABP2P12104 132 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 CRIP2P52943 208 aaPredicted RBP6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 C20orf78Q9BR46 151 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 ESM1Q9NQ30 184 aa6.97□□□□□ -1.29
TMEM39A-201ENST00000319172 PAX4O43316 350 aa6.96□□□□□ -1.29
TMEM39A-201ENST00000319172 MPV17L2Q567V2 206 aa6.96□□□□□ -1.29
TMEM39A-201ENST00000319172 GAGE10A6NGK3 116 aa6.96□□□□□ -1.3
TMEM39A-201ENST00000319172 LINC01549A6NIU2 74 aa6.96□□□□□ -1.3
TMEM39A-201ENST00000319172 DEFB4AO15263 64 aa6.96□□□□□ -1.3
TMEM39A-201ENST00000319172 PLNP26678 52 aa6.96□□□□□ -1.3
TMEM39A-201ENST00000319172 TRAV2A0A0B4J234 112 aa6.96□□□□□ -1.3
TMEM39A-201ENST00000319172 NHP2Q9NX24 153 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-201ENST00000319172 PRM2P04554 102 aa6.95□□□□□ -1.3
TMEM39A-201ENST00000319172 DCANP1Q8TF63 244 aa6.95□□□□□ -1.3
TMEM39A-201ENST00000319172 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
TMEM39A-201ENST00000319172 DEFB135Q30KP9 77 aa6.95□□□□□ -1.3
TMEM39A-201ENST00000319172 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
TMEM39A-201ENST00000319172 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-201ENST00000319172 SEC11AP67812 179 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 GAGE6Q13070 117 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 ZNF625Q96I27 306 aaPredicted RBP6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 AGRNO00468 2067 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 TRBV25-1A0A075B6N4 114 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 KALRNO60229 2985 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 IGLC3P0DOY3 106 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 SS18Q15532 418 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 CHAC1Q9BUX1 264 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 NPC2P61916 151 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 CRLF1O75462 422 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 NDUFA11Q86Y39 141 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
TMEM39A-201ENST00000319172 TEP1Q99973 2627 aaKnown RBP6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 EREGO14944 169 aa6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 PMVKQ15126 192 aa6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 ANGP03950 147 aaKnown RBP6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 LGALS9CQ6DKI2 356 aa6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 S100A7L2Q5SY68 101 aa6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 MORN3Q6PF18 240 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 PRIMA1Q86XR5 153 aa6.93□□□□□ -1.3
TMEM39A-201ENST00000319172 CFAP47Q6ZTR5 3102 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 UBE2V1Q13404 147 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 PRSS29PA6NIE9 313 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 F8VRH5 84 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 H3BUT2 72 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 CLPSL2Q6UWE3 100 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 RNF152Q8N8N0 203 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 P0DMU3 169 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 Q9HAA7 133 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 TMEM243Q9BU79 118 aa6.92□□□□□ -1.3
TMEM39A-201ENST00000319172 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 DMDP11532 3685 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 SLC25A20O43772 301 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 MED14OSP0DP75 135 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 HSD52Q0P140 79 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 ZFP2Q6ZN57 461 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 CST9LQ9H4G1 147 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 GAS8-AS1O95177 125 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 RASL10AQ92737 203 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
TMEM39A-201ENST00000319172 Q6ZTI0 123 aa6.9□□□□□ -1.3
TMEM39A-201ENST00000319172 C16orf74Q96GX8 76 aa6.9□□□□□ -1.3
TMEM39A-201ENST00000319172 ESDP10768 282 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms