RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 EEF1AKMT3Q96AZ1 226 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 DUX3Q96PT4 197 aa7.19□□□□□ -1.26
RPGR-201ENST00000318842 FN1P02751 2386 aaKnown RBP7.19□□□□□ -1.26
RPGR-201ENST00000318842 ATP5J2P56134 94 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 ORMDL2Q53FV1 153 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 MUSTN1Q8IVN3 82 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 ZNF625Q96I27 306 aaPredicted RBP7.18□□□□□ -1.26
RPGR-201ENST00000318842 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 LINC00315P59091 139 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 SPINK13Q1W4C9 94 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 TTC32Q5I0X7 151 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 MAPK1IP1LQ8NDC0 245 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 CLEC2BQ92478 149 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 SIRPDQ9H106 197 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 TRAV41A0A0B4J266 112 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 IGHV3-38A0A0C4DH36 116 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 CENPVL3A0A0U1RRI6 287 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 CCDC179H3BU77 68 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 IGHV4-38-2P0DP08 117 aa7.18□□□□□ -1.26
RPGR-201ENST00000318842 J3QQQ9 107 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 ITLN2Q8WWU7 325 aaPredicted RBP7.17□□□□□ -1.26
RPGR-201ENST00000318842 RHPN1-AS1Q9BWJ2 59 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 IGIPA6NJ69 53 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 UBE2D3P61077 147 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 UBE2D2P62837 147 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 C5orf56Q8N8D9 126 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 AMELXQ99217 191 aa7.17□□□□□ -1.26
RPGR-201ENST00000318842 TRAV12-1A0A0B4J245 112 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 TRAV21A0A0B4J279 112 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 A8MWV9 139 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 SLC25A20O43772 301 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 TEN1Q86WV5 123 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 LGALS3P17931 250 aaKnown RBP7.16□□□□□ -1.26
RPGR-201ENST00000318842 PSMG4Q5JS54 123 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 NRGNQ92686 78 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 M0R1W7 72 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 TAL2Q16559 108 aa7.16□□□□□ -1.26
RPGR-201ENST00000318842 NHLRC4P0CG21 123 aaPredicted RBP7.15□□□□□ -1.26
RPGR-201ENST00000318842 LY6DQ14210 128 aa7.15□□□□□ -1.26
RPGR-201ENST00000318842 IGHV3-16A0A0C4DH30 117 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 NPFFO15130 113 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 PMVKQ15126 192 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 TMEM190Q8WZ59 177 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 PRO1854Q9UHT4 67 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 PKD1L2Q7Z442 2459 aa7.15□□□□□ -1.27
RPGR-201ENST00000318842 H3BUX3 64 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 C19orf84I3L1E1 186 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 KIF25-AS1Q9Y6Z4 181 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 RS1O15537 224 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 Q8N1Y9 231 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 NOTCH2Q04721 2471 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 SOCS3O14543 225 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 TRIAP1O43715 76 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 SCGB2A1O75556 95 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 MINOS1Q5TGZ0 78 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 C11orf71Q6IPW1 123 aa7.14□□□□□ -1.27
RPGR-201ENST00000318842 SETXQ7Z333 2677 aaKnown RBP7.14□□□□□ -1.27
RPGR-201ENST00000318842 IGHV4-4A0A075B6R2 117 aa7.13□□□□□ -1.27
RPGR-201ENST00000318842 NDUFA7O95182 113 aa7.13□□□□□ -1.27
RPGR-201ENST00000318842 SRSF2Q01130 221 aaKnown RBP7.13□□□□□ -1.27
RPGR-201ENST00000318842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
RPGR-201ENST00000318842 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
RPGR-201ENST00000318842 EBI3Q14213 229 aa7.13□□□□□ -1.27
RPGR-201ENST00000318842 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
RPGR-201ENST00000318842 U3KQE9 123 aa7.13□□□□□ -1.27
RPGR-201ENST00000318842 MTORP42345 2549 aa7.13□□□□□ -1.27
RPGR-201ENST00000318842 ANKRD17O75179 2603 aaKnown RBP7.12□□□□□ -1.27
RPGR-201ENST00000318842 IGHV3-33P01772 117 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 ZNF876PQ49A33 203 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 M0QXV9 152 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
RPGR-201ENST00000318842 UBE2E1P51965 193 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 POLR2KP53803 58 aaKnown RBP7.12□□□□□ -1.27
RPGR-201ENST00000318842 LMO4P61968 165 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 C5orf47Q569G3 176 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 C9orf139Q6ZV77 190 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 VPREB3Q9UKI3 123 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 Q6ZSN1 163 aa7.12□□□□□ -1.27
RPGR-201ENST00000318842 GCN1Q92616 2671 aaKnown RBP7.11□□□□□ -1.27
RPGR-201ENST00000318842 TRBV7-1A0A0A6YYK4 115 aa7.11□□□□□ -1.27
RPGR-201ENST00000318842 SYNJ2BPP57105 145 aa7.11□□□□□ -1.27
RPGR-201ENST00000318842 HERVK_113P61574 105 aa7.11□□□□□ -1.27
RPGR-201ENST00000318842 TEX29Q8N6K0 151 aa7.11□□□□□ -1.27
RPGR-201ENST00000318842 TMEM263Q8WUH6 116 aaKnown RBP7.11□□□□□ -1.27
RPGR-201ENST00000318842 IGHV4-61A0A0C4DH41 118 aa7.1□□□□□ -1.27
RPGR-201ENST00000318842 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
RPGR-201ENST00000318842 RBMY1CP0DJD4 496 aa7.1□□□□□ -1.27
RPGR-201ENST00000318842 RBMY1FQ15415 496 aaKnown RBP7.1□□□□□ -1.27
RPGR-201ENST00000318842 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
RPGR-201ENST00000318842 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
RPGR-201ENST00000318842 AVPP01185 164 aa7.1□□□□□ -1.27
RPGR-201ENST00000318842 C18orf65Q6ZTR6 163 aa7.1□□□□□ -1.27
RPGR-201ENST00000318842 CHCHD5Q9BSY4 110 aa7.1□□□□□ -1.27
RPGR-201ENST00000318842 VCX2Q9H322 139 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms