RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 SNCGO76070 127 aa14.55□□□□□ -0.08
ZNF554-201ENST00000317243 IGHV4-59P01825 116 aa14.55□□□□□ -0.08
ZNF554-201ENST00000317243 TRBV7-9A0A0J9YWB2 115 aa14.55□□□□□ -0.08
ZNF554-201ENST00000317243 H7C2G1 150 aa14.55□□□□□ -0.08
ZNF554-201ENST00000317243 HERV-K104P63124 156 aa14.55□□□□□ -0.08
ZNF554-201ENST00000317243 IGHV3-30P01768 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 IGHV3-30-5P0DP03 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 SMIM20Q8N5G0 67 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 GAGE12JA6NER3 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 GAGE7O76087 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 DUSP14O95147 198 aaKnown RBP14.54□□□□□ -0.08
ZNF554-201ENST00000317243 IGHG2P01859 326 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 CRYGDP07320 174 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 GAGE12FP0CL80 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 GAGE12GP0CL81 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 GAGE12IP0CL82 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 GAGE4Q13068 117 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 PRO1854Q9UHT4 67 aa14.54□□□□□ -0.08
ZNF554-201ENST00000317243 TSPEAR-AS2P59090 65 aa14.53□□□□□ -0.08
ZNF554-201ENST00000317243 KRTAP10-9P60411 292 aa14.53□□□□□ -0.08
ZNF554-201ENST00000317243 HIST2H2BDQ6DRA6 164 aa14.53□□□□□ -0.08
ZNF554-201ENST00000317243 TENM4Q6N022 2769 aa14.53□□□□□ -0.08
ZNF554-201ENST00000317243 GNRH2O43555 120 aa14.53□□□□□ -0.08
ZNF554-201ENST00000317243 DPH3P1Q9H4G8 78 aa14.53□□□□□ -0.08
ZNF554-201ENST00000317243 FAM223BA6NKX1 122 aa14.52□□□□□ -0.08
ZNF554-201ENST00000317243 RNASE4P34096 147 aaKnown RBP14.52□□□□□ -0.08
ZNF554-201ENST00000317243 TTC32Q5I0X7 151 aa14.52□□□□□ -0.08
ZNF554-201ENST00000317243 FAM223AQ8IWN6 122 aa14.52□□□□□ -0.08
ZNF554-201ENST00000317243 MRPL53Q96EL3 112 aaKnown RBP14.52□□□□□ -0.08
ZNF554-201ENST00000317243 DEFB112Q30KQ8 113 aa14.52□□□□□ -0.09
ZNF554-201ENST00000317243 ASIPP42127 132 aa14.51□□□□□ -0.09
ZNF554-201ENST00000317243 ZFAND2AQ8N6M9 145 aa14.51□□□□□ -0.09
ZNF554-201ENST00000317243 OR10J6PQ8NGY7 276 aa14.51□□□□□ -0.09
ZNF554-201ENST00000317243 NTN5Q8WTR8 489 aaPredicted RBP14.51□□□□□ -0.09
ZNF554-201ENST00000317243 IGLV4-69A0A075B6H9 119 aa14.5□□□□□ -0.09
ZNF554-201ENST00000317243 RNF223E7ERA6 249 aa14.5□□□□□ -0.09
ZNF554-201ENST00000317243 TRAV21A0A0B4J279 112 aa14.5□□□□□ -0.09
ZNF554-201ENST00000317243 MUC4Q99102 2169 aa14.5□□□□□ -0.09
ZNF554-201ENST00000317243 IFITM1P13164 125 aa14.5□□□□□ -0.09
ZNF554-201ENST00000317243 SLC25A29Q8N8R3 303 aa14.5□□□□□ -0.09
ZNF554-201ENST00000317243 TSHBP01222 138 aa14.49□□□□□ -0.09
ZNF554-201ENST00000317243 RPL32P62910 135 aaKnown RBP14.49□□□□□ -0.09
ZNF554-201ENST00000317243 TMEM170BQ5T4T1 132 aa14.49□□□□□ -0.09
ZNF554-201ENST00000317243 C9orf139Q6ZV77 190 aa14.49□□□□□ -0.09
ZNF554-201ENST00000317243 Q8N1Y9 231 aa14.49□□□□□ -0.09
ZNF554-201ENST00000317243 HERVK_113P61574 105 aa14.49□□□□□ -0.09
ZNF554-201ENST00000317243 DUX5Q96PT3 197 aa14.49□□□□□ -0.09
ZNF554-201ENST00000317243 CHD6Q8TD26 2715 aa14.48□□□□□ -0.09
ZNF554-201ENST00000317243 A4D1N5 150 aa14.48□□□□□ -0.09
ZNF554-201ENST00000317243 B4DSR2 109 aa14.48□□□□□ -0.09
ZNF554-201ENST00000317243 EIF4EBP3O60516 100 aaPredicted RBP14.48□□□□□ -0.09
ZNF554-201ENST00000317243 ELANEP08246 267 aa14.48□□□□□ -0.09
ZNF554-201ENST00000317243 RHPN1-AS1Q9BWJ2 59 aa14.48□□□□□ -0.09
ZNF554-201ENST00000317243 LINC00477Q96M19 166 aa14.47□□□□□ -0.09
ZNF554-201ENST00000317243 ITPR3Q14573 2671 aa14.47□□□□□ -0.09
ZNF554-201ENST00000317243 TEX49A0A1B0GTD5 131 aa14.47□□□□□ -0.09
ZNF554-201ENST00000317243 SOCS3O14543 225 aa14.47□□□□□ -0.09
ZNF554-201ENST00000317243 FAM159AQ6UWV7 190 aa14.47□□□□□ -0.09
ZNF554-201ENST00000317243 TP53TG1Q9Y2A0 90 aa14.47□□□□□ -0.09
ZNF554-201ENST00000317243 JPT2Q9H910 190 aa14.46□□□□□ -0.09
ZNF554-201ENST00000317243 NDUFA4O00483 81 aa14.46□□□□□ -0.09
ZNF554-201ENST00000317243 RPL39P62891 51 aaKnown RBP14.46□□□□□ -0.09
ZNF554-201ENST00000317243 PRRC2AP48634 2157 aaKnown RBP14.46□□□□□ -0.1
ZNF554-201ENST00000317243 FAM110AQ9BQ89 295 aa14.45□□□□□ -0.1
ZNF554-201ENST00000317243 IGLV1-40P01703 118 aa14.45□□□□□ -0.1
ZNF554-201ENST00000317243 IGHV3-33P01772 117 aa14.44□□□□□ -0.1
ZNF554-201ENST00000317243 RNASE3P12724 160 aaKnown RBP14.44□□□□□ -0.1
ZNF554-201ENST00000317243 BEX4Q9NWD9 120 aaPredicted RBP14.44□□□□□ -0.1
ZNF554-201ENST00000317243 LENEPQ9Y5L5 61 aa14.44□□□□□ -0.1
ZNF554-201ENST00000317243 ODF3Q96PU9 254 aa14.44□□□□□ -0.1
ZNF554-201ENST00000317243 CR1P17927 2039 aa14.44□□□□□ -0.1
ZNF554-201ENST00000317243 A0A087WWL8 130 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 F5H697 171 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 C15orf53Q8NAA6 179 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 ZNRF2Q8NHG8 242 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 AMELXQ99217 191 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 ACANP16112 2415 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 A0A096LNT2 108 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 Q1RN00 199 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 TRAV2A0A0B4J234 112 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 J3QQQ9 107 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 CFHR3Q02985 330 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 PMVKQ15126 192 aa14.43□□□□□ -0.1
ZNF554-201ENST00000317243 FLNAP21333 2647 aaKnown RBP14.42□□□□□ -0.1
ZNF554-201ENST00000317243 OVOL1O14753 267 aa14.42□□□□□ -0.1
ZNF554-201ENST00000317243 IGKV3-20P01619 116 aa14.42□□□□□ -0.1
ZNF554-201ENST00000317243 IGIPA6NJ69 53 aa14.42□□□□□ -0.1
ZNF554-201ENST00000317243 WNK1Q9H4A3 2382 aa14.41□□□□□ -0.1
ZNF554-201ENST00000317243 TRAV8-4A0A0B4J246 113 aa14.41□□□□□ -0.1
ZNF554-201ENST00000317243 LGALS3P17931 250 aaKnown RBP14.41□□□□□ -0.1
ZNF554-201ENST00000317243 TMEM263Q8WUH6 116 aaKnown RBP14.41□□□□□ -0.1
ZNF554-201ENST00000317243 USMG5Q96IX5 58 aa14.41□□□□□ -0.1
ZNF554-201ENST00000317243 LINC01620Q4KN68 170 aa14.41□□□□□ -0.1
ZNF554-201ENST00000317243 PAPPA-AS1Q5QFB9 102 aa14.41□□□□□ -0.1
ZNF554-201ENST00000317243 IGHV3-64A0A075B6Q5 118 aa14.4□□□□□ -0.1
ZNF554-201ENST00000317243 FAM74A4Q5TZK3 123 aa14.4□□□□□ -0.1
ZNF554-201ENST00000317243 MUSTN1Q8IVN3 82 aa14.4□□□□□ -0.1
ZNF554-201ENST00000317243 C3orf56Q8N813 242 aa14.39□□□□□ -0.11
ZNF554-201ENST00000317243 DAZ1Q9NQZ3 744 aaKnown RBP14.39□□□□□ -0.11
ZNF554-201ENST00000317243 M0QXV9 152 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms