RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 UNQ9165/PRO28630Q6UXU0 137 aa12.86□□□□□ -0.35
SCAMP4-201ENST00000316097 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
SCAMP4-201ENST00000316097 TSHBP01222 138 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 CFC1BP0CG36 223 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 CFC1P0CG37 223 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 ARL3P36405 182 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 KIR2DL4Q99706 377 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 U3KQE9 123 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 SCGB1C2P0DMR2 95 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 TSPEAR-AS2P59090 65 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 ANKRD29Q8N6D5 301 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 RNF183Q96D59 192 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 VPREB3Q9UKI3 123 aa12.85□□□□□ -0.35
SCAMP4-201ENST00000316097 TRBV20-1A0A075B6N2 111 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 GNRH2O43555 120 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 ZNF688P0C7X2 276 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 C10orf126Q8N4M7 172 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 LINC00477Q96M19 166 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 MYO9AB2RTY4 2548 aa12.84□□□□□ -0.35
SCAMP4-201ENST00000316097 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
SCAMP4-201ENST00000316097 RNASE4P34096 147 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-201ENST00000316097 RPL39P62891 51 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-201ENST00000316097 CFHR3Q02985 330 aa12.83□□□□□ -0.36
SCAMP4-201ENST00000316097 PMVKQ15126 192 aa12.82□□□□□ -0.36
SCAMP4-201ENST00000316097 SBSPONQ8IVN8 264 aa12.82□□□□□ -0.36
SCAMP4-201ENST00000316097 ERG28Q9UKR5 140 aa12.82□□□□□ -0.36
SCAMP4-201ENST00000316097 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
SCAMP4-201ENST00000316097 VCX2Q9H322 139 aa12.82□□□□□ -0.36
SCAMP4-201ENST00000316097 PPP1R17O96001 155 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 RNASE3P12724 160 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 EDN2P20800 178 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 SLC25A29Q8N8R3 303 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 MTORP42345 2549 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 IGIPA6NJ69 53 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 F6UB75 175 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 PRO1854Q9UHT4 67 aa12.81□□□□□ -0.36
SCAMP4-201ENST00000316097 RAX2Q96IS3 184 aa12.8□□□□□ -0.36
SCAMP4-201ENST00000316097 ANAPC13Q9BS18 74 aa12.8□□□□□ -0.36
SCAMP4-201ENST00000316097 ZNRF2Q8NHG8 242 aa12.79□□□□□ -0.36
SCAMP4-201ENST00000316097 SMR3AQ99954 134 aa12.79□□□□□ -0.36
SCAMP4-201ENST00000316097 ZNF702PQ9H963 129 aa12.79□□□□□ -0.36
SCAMP4-201ENST00000316097 OVOL1O14753 267 aa12.79□□□□□ -0.36
SCAMP4-201ENST00000316097 USMG5Q96IX5 58 aa12.79□□□□□ -0.36
SCAMP4-201ENST00000316097 JPT2Q9H910 190 aa12.79□□□□□ -0.36
SCAMP4-201ENST00000316097 IGKV3-7A0A075B6H7 116 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 PSMB8P28062 276 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 KRTAP1-1Q07627 177 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 C9JAW5 83 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 SLC25A20O43772 301 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 RPL11P62913 178 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 ZFAND6Q6FIF0 208 aa12.78□□□□□ -0.36
SCAMP4-201ENST00000316097 H7C2G1 150 aa12.77□□□□□ -0.36
SCAMP4-201ENST00000316097 J3QQQ9 107 aa12.77□□□□□ -0.36
SCAMP4-201ENST00000316097 LINC00315P59091 139 aa12.77□□□□□ -0.36
SCAMP4-201ENST00000316097 TRPT1Q86TN4 253 aaKnown RBP12.77□□□□□ -0.36
SCAMP4-201ENST00000316097 YAE1D1Q9NRH1 226 aa12.77□□□□□ -0.36
SCAMP4-201ENST00000316097 LGALS3P17931 250 aaKnown RBP12.77□□□□□ -0.37
SCAMP4-201ENST00000316097 AMELXQ99217 191 aa12.77□□□□□ -0.37
SCAMP4-201ENST00000316097 KIF25-AS1Q9Y6Z4 181 aa12.77□□□□□ -0.37
SCAMP4-201ENST00000316097 A0A087WWL8 130 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 A4D1N5 150 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 TMEM262E9PQX1 116 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 POLR2KP53803 58 aaKnown RBP12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 SUMO4Q6EEV6 95 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 TEX29Q8N6K0 151 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 MUC4Q99102 2169 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 F5H697 171 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 H3BUA1 57 aa12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
SCAMP4-201ENST00000316097 SOCS3O14543 225 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 TIMM17AQ99595 171 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 IGHV4OR15-8A0A075B7B6 117 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 A0A087WW49 117 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 SDHAF1A6NFY7 115 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 VCYO14598 125 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 SRD5A1P18405 259 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 ZNF876PQ49A33 203 aa12.75□□□□□ -0.37
SCAMP4-201ENST00000316097 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 FAM19A4Q96LR4 140 aa12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 SS18L2Q9UHA2 77 aa12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 NDUFA4O00483 81 aa12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 RPL32P62910 135 aaKnown RBP12.74□□□□□ -0.37
SCAMP4-201ENST00000316097 OTOGQ6ZRI0 2925 aa12.73□□□□□ -0.37
SCAMP4-201ENST00000316097 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms