RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 LOC100131303A0A0U1RQF7 123 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 PRSS1P07477 247 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 CSNK1G2-AS1Q8NCQ2 148 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 IGKV2D-26A0A0A0MRZ7 120 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 IGLC3P0DOY3 106 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 FCER1GP30273 86 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 RNASE8Q8TDE3 154 aaKnown RBP5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 MRAP2Q96G30 205 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 SNHG12Q9BXW3 62 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 HSPB8Q9UJY1 196 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 TRAV2A0A0B4J234 112 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 TSHBP01222 138 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 DEFA6Q01524 100 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 NXT2Q9NPJ8 142 aaKnown RBP5.03□□□□□ -1.6
LYSMD3-201ENST00000315948 TRAV25A0A0B4J276 109 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE12BA1L429 117 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE7O76087 117 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE12FP0CL80 117 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE12GP0CL81 117 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE12IP0CL82 117 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 DEFB135Q30KP9 77 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 TRGV11A0A075B6L2 103 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 TRAV9-2A0A087WT02 112 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 K7EMI3 77 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 MED14OSP0DP75 135 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 UFSP1Q6NVU6 142 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 C2orf66Q6UXQ4 117 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 PCP2Q8IVA1 136 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 MRPL35Q9NZE8 188 aaKnown RBP5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 TP53TG1Q9Y2A0 90 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 M0R2P5 195 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 ODF1Q14990 250 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 ST20Q9HBF5 79 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 GOLT1BQ9Y3E0 138 aa5.02□□□□□ -1.61
LYSMD3-201ENST00000315948 Q6ZN92 141 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 NDUFAF3Q9BU61 184 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 DEFB130BP0DP73 79 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 DEFB130AP0DP74 79 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 ZFP2Q6ZN57 461 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 ERASQ7Z444 233 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 GTSCR1Q86UQ5 136 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 TENM2Q9NT68 2774 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 SYT8Q8NBV8 401 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 C20orf144Q9BQM9 153 aa5.01□□□□□ -1.61
LYSMD3-201ENST00000315948 LINC01546A6NGU7 62 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 KRTAP10-11P60412 298 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 ZNF415Q09FC8 603 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 SCGB3A1Q96QR1 104 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 MIEN1Q9BRT3 115 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 A0A1B0GV90 55 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 PET117Q6UWS5 81 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 STAB2Q8WWQ8 2551 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5□□□□□ -1.61
LYSMD3-201ENST00000315948 IGKV2-29A2NJV5 120 aaPredicted RBP5□□□□□ -1.61
LYSMD3-201ENST00000315948 NMUP48645 174 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 RETNQ9HD89 108 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 LAMTOR2Q9Y2Q5 125 aa5□□□□□ -1.61
LYSMD3-201ENST00000315948 HINT1P49773 126 aaPredicted RBP5□□□□□ -1.61
LYSMD3-201ENST00000315948 NUTF2P61970 127 aaKnown RBP5□□□□□ -1.61
LYSMD3-201ENST00000315948 BAALCQ8WXS3 180 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 A0A096LPF7 62 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 SLC25A29Q8N8R3 303 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 FAM104AQ969W3 186 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 C20orf78Q9BR46 151 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 PRSS47A8MTI9 375 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 OR4C5Q8NGB2 326 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 FAM110AQ9BQ89 295 aa4.99□□□□□ -1.61
LYSMD3-201ENST00000315948 TRGV2A0A075B6R0 118 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 K7EP13 123 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 ZNRF2Q8NHG8 242 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 IL17DQ8TAD2 202 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 IGHV3-64A0A075B6Q5 118 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 TRBV27A0A0K0K1C4 114 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE12JA6NER3 117 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 G3V4G9 280 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE1Q13065 139 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE4Q13068 117 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE5Q13069 117 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 GAGE13Q4V321 117 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 TMEM263Q8WUH6 116 aaKnown RBP4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 X6R8D5 127 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 LINC00694P0DN24 101 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 C3orf56Q8N813 242 aa4.98□□□□□ -1.61
LYSMD3-201ENST00000315948 IGIPA6NJ69 53 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 RRN3P1Q2M238 152 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 C20orf202A1L168 122 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 VCYO14598 125 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 IGHV4-30-4P0DP06 118 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 HNRNPA3P51991 378 aaKnown RBP4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 LGALS9BQ3B8N2 356 aa4.97□□□□□ -1.61
LYSMD3-201ENST00000315948 MPV17L2Q567V2 206 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms