RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 KIR2DL4Q99706 377 aa13.34□□□□□ -0.27
CCDC43-201ENST00000315286 MRPL35Q9NZE8 188 aaKnown RBP13.34□□□□□ -0.27
CCDC43-201ENST00000315286 IGKCP01834 107 aa13.33□□□□□ -0.27
CCDC43-201ENST00000315286 PF4P02776 101 aa13.33□□□□□ -0.27
CCDC43-201ENST00000315286 PIK3CD-AS1Q5SR53 167 aa13.33□□□□□ -0.27
CCDC43-201ENST00000315286 PTH2Q96A98 100 aa13.33□□□□□ -0.27
CCDC43-201ENST00000315286 A0A087WX48 190 aa13.33□□□□□ -0.28
CCDC43-201ENST00000315286 A8MWV9 139 aa13.33□□□□□ -0.28
CCDC43-201ENST00000315286 UFSP1Q6NVU6 142 aa13.33□□□□□ -0.28
CCDC43-201ENST00000315286 LINC00482Q8N8I6 264 aa13.33□□□□□ -0.28
CCDC43-201ENST00000315286 FAM110AQ9BQ89 295 aa13.33□□□□□ -0.28
CCDC43-201ENST00000315286 CRLF1O75462 422 aa13.32□□□□□ -0.28
CCDC43-201ENST00000315286 DPM2O94777 84 aa13.32□□□□□ -0.28
CCDC43-201ENST00000315286 SPXQ9BT56 116 aa13.32□□□□□ -0.28
CCDC43-201ENST00000315286 HINT1P49773 126 aaPredicted RBP13.32□□□□□ -0.28
CCDC43-201ENST00000315286 ERASQ7Z444 233 aa13.32□□□□□ -0.28
CCDC43-201ENST00000315286 MRPL16Q9NX20 251 aaKnown RBP13.32□□□□□ -0.28
CCDC43-201ENST00000315286 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
CCDC43-201ENST00000315286 FGF6P10767 208 aa13.31□□□□□ -0.28
CCDC43-201ENST00000315286 CFAP126Q5VTH2 177 aa13.31□□□□□ -0.28
CCDC43-201ENST00000315286 CYSLTR1Q9Y271 337 aa13.31□□□□□ -0.28
CCDC43-201ENST00000315286 TRAV12-1A0A0B4J245 112 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 P0DMU3 169 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 FAM231AP0DMU4 169 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 FAM231CP0DMU5 169 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 NEXN-AS1Q8NBZ9 246 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
CCDC43-201ENST00000315286 G0S2P27469 103 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 Q6ZSN1 163 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 BAALCQ8WXS3 180 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
CCDC43-201ENST00000315286 TENM1Q9UKZ4 2725 aa13.29□□□□□ -0.28
CCDC43-201ENST00000315286 VWFP04275 2813 aa13.29□□□□□ -0.28
CCDC43-201ENST00000315286 H7C1H1 209 aa13.29□□□□□ -0.28
CCDC43-201ENST00000315286 RPL39P62891 51 aaKnown RBP13.29□□□□□ -0.28
CCDC43-201ENST00000315286 RIPPLY3P57055 190 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 LURAP1LQ8IV03 231 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 FLNBO75369 2602 aaKnown RBP13.28□□□□□ -0.28
CCDC43-201ENST00000315286 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 NMUP48645 174 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 C2orf91Q6ZV80 131 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 BOD1L2Q8IYS8 172 aa13.28□□□□□ -0.28
CCDC43-201ENST00000315286 IGKV2D-26A0A0A0MRZ7 120 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 F8VRH5 84 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 TSHBP01222 138 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 COL5A1-AS1Q5SY13 56 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 GTSCR1Q86UQ5 136 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 PCP2Q8IVA1 136 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 IL17DQ8TAD2 202 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 RNASE8Q8TDE3 154 aaKnown RBP13.27□□□□□ -0.28
CCDC43-201ENST00000315286 Q9UF83 564 aa13.27□□□□□ -0.28
CCDC43-201ENST00000315286 CHTOPQ9Y3Y2 248 aaKnown RBP13.27□□□□□ -0.28
CCDC43-201ENST00000315286 I3L3M4 83 aa13.27□□□□□ -0.29
CCDC43-201ENST00000315286 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
CCDC43-201ENST00000315286 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.29
CCDC43-201ENST00000315286 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
CCDC43-201ENST00000315286 RS1O15537 224 aa13.26□□□□□ -0.29
CCDC43-201ENST00000315286 LINC01549A6NIU2 74 aa13.25□□□□□ -0.29
CCDC43-201ENST00000315286 PLNP26678 52 aa13.25□□□□□ -0.29
CCDC43-201ENST00000315286 RHODO00212 210 aa13.25□□□□□ -0.29
CCDC43-201ENST00000315286 RHOHQ15669 191 aa13.25□□□□□ -0.29
CCDC43-201ENST00000315286 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
CCDC43-201ENST00000315286 ATRQ13535 2644 aa13.24□□□□□ -0.29
CCDC43-201ENST00000315286 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
CCDC43-201ENST00000315286 F8P00451 2351 aa13.24□□□□□ -0.29
CCDC43-201ENST00000315286 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
CCDC43-201ENST00000315286 TNFRSF18Q9Y5U5 241 aa13.24□□□□□ -0.29
CCDC43-201ENST00000315286 DLEU1O43261 78 aa13.23□□□□□ -0.29
CCDC43-201ENST00000315286 IGHV3-53P01767 116 aa13.23□□□□□ -0.29
CCDC43-201ENST00000315286 CSNK1G2-AS1Q8NCQ2 148 aa13.23□□□□□ -0.29
CCDC43-201ENST00000315286 TMEM141Q96I45 108 aa13.23□□□□□ -0.29
CCDC43-201ENST00000315286 TIMM17AQ99595 171 aa13.23□□□□□ -0.29
CCDC43-201ENST00000315286 TEP1Q99973 2627 aaKnown RBP13.22□□□□□ -0.29
CCDC43-201ENST00000315286 TTTY13Q9BZ97 58 aa13.22□□□□□ -0.29
CCDC43-201ENST00000315286 BVES-AS1Q5T3Y7 98 aa13.22□□□□□ -0.29
CCDC43-201ENST00000315286 C20orf203Q8NBC4 194 aa13.22□□□□□ -0.29
CCDC43-201ENST00000315286 C1QTNF4Q9BXJ3 329 aa13.22□□□□□ -0.29
CCDC43-201ENST00000315286 Q6ZTI0 123 aa13.21□□□□□ -0.29
CCDC43-201ENST00000315286 C12orf54Q6X4T0 127 aa13.2□□□□□ -0.3
CCDC43-201ENST00000315286 OR4C5Q8NGB2 326 aa13.2□□□□□ -0.3
CCDC43-201ENST00000315286 CITED1Q99966 193 aa13.2□□□□□ -0.3
CCDC43-201ENST00000315286 PMVKQ15126 192 aa13.2□□□□□ -0.3
CCDC43-201ENST00000315286 CST9LQ9H4G1 147 aa13.2□□□□□ -0.3
CCDC43-201ENST00000315286 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
CCDC43-201ENST00000315286 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
CCDC43-201ENST00000315286 SIVA1O15304 175 aa13.19□□□□□ -0.3
CCDC43-201ENST00000315286 ZNF479Q96JC4 524 aa13.19□□□□□ -0.3
CCDC43-201ENST00000315286 OPRPNQ99935 248 aaPredicted RBP13.19□□□□□ -0.3
CCDC43-201ENST00000315286 INSL3P51460 131 aa13.19□□□□□ -0.3
CCDC43-201ENST00000315286 DAZ2Q13117 558 aaKnown RBP13.18□□□□□ -0.3
CCDC43-201ENST00000315286 C9orf66Q5T8R8 295 aa13.18□□□□□ -0.3
CCDC43-201ENST00000315286 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
CCDC43-201ENST00000315286 IGLV4-69A0A075B6H9 119 aa13.17□□□□□ -0.3
CCDC43-201ENST00000315286 DNAJC30Q96LL9 226 aa13.17□□□□□ -0.3
CCDC43-201ENST00000315286 EMP1P54849 157 aa13.17□□□□□ -0.3
CCDC43-201ENST00000315286 TMEM97Q5BJF2 176 aa13.16□□□□□ -0.3
CCDC43-201ENST00000315286 MAPKAPK5-AS1Q8N8E1 139 aa13.16□□□□□ -0.3
CCDC43-201ENST00000315286 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms