RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 OTORQ9NRC9 128 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 C19orf54Q5BKX5 351 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 Q8N8P6 123 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 COL6A6A6NMZ7 2263 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 PIEZO1Q92508 2521 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 ATP5G1P05496 136 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 PLNP26678 52 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 C4orf48Q5BLP8 95 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 FAM223AQ8IWN6 122 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 NEXN-AS1Q8NBZ9 246 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 SMCR5Q8TEV8 140 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 LINC00643Q86TS7 51 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 TMEM243Q9BU79 118 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 SMAD5-AS1Q9Y6J3 95 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 TRBV19A0A075B6N1 114 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 M0R3E3 92 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 PRSS2P07478 247 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 CRIP1P50238 77 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 SS18Q15532 418 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 Q6ZS46 218 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 Q86TA4 180 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 BPESC1Q9GZL8 116 aa7.18□□□□□ -1.26
RBFOX1-201ENST00000311745 NBASA2RRP1 2371 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 MINOS1Q5TGZ0 78 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 FMC1Q96HJ9 113 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 MINOS1-NBL1R4GNA1 71 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 IGKV3D-7A0A0C4DH55 119 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 H7C423 109 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 LYZP61626 148 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 CLEC2BQ92478 149 aa7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
RBFOX1-201ENST00000311745 CTSGP08311 255 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 IGHV3-33P01772 117 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 UBE2E1P51965 193 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 PAX8Q06710 450 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 NDUFC2O95298 119 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 PMAIP1Q13794 54 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
RBFOX1-201ENST00000311745 A0A087WVE0 104 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 CLPSL1A2RUU4 121 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 F8VRH5 84 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 SH2D1AO60880 128 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 IGHV3-23P01764 117 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 MSRB1Q9NZV6 116 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
RBFOX1-201ENST00000311745 FAM240AA0A1B0GVK7 77 aa7.15□□□□□ -1.27
RBFOX1-201ENST00000311745 SAA4P35542 130 aa7.15□□□□□ -1.27
RBFOX1-201ENST00000311745 ZFAND3Q9H8U3 227 aa7.15□□□□□ -1.27
RBFOX1-201ENST00000311745 U3KQE9 123 aa7.15□□□□□ -1.27
RBFOX1-201ENST00000311745 RBM3P98179 157 aaKnown RBP7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 PRIMA1Q86XR5 153 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 RPL18AQ02543 176 aaKnown RBP7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 FHL2Q14192 279 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 PLGLAQ15195 96 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 RNF182Q8N6D2 247 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 LINC01619G3V211 115 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 H3BT86 120 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 TRIAP1O43715 76 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 DEFB104AQ8WTQ1 72 aa7.14□□□□□ -1.27
RBFOX1-201ENST00000311745 A0A0J9YY99 117 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 COX8CQ7Z4L0 72 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 TMEM75Q8N9X5 138 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 SCGB3A1Q96QR1 104 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 TPRP12270 2363 aaKnown RBP7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 TRAV12-2A0A075B6T6 113 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 TRBV7-1A0A0A6YYK4 115 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 ATP6V0E1O15342 81 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 C20orf197Q8N268 126 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 C5orf56Q8N8D9 126 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 SPTA1P02549 2419 aa7.13□□□□□ -1.27
RBFOX1-201ENST00000311745 IGHV4-61A0A0C4DH41 118 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 IGHV3-30P01768 117 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 IGHV3-30-5P0DP03 117 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 C9orf139Q6ZV77 190 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 DAZ4Q86SG3 579 aaKnown RBP7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 C14orf178Q8N769 122 aaPredicted RBP7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 DAZ1Q9NQZ3 744 aaKnown RBP7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 COX6CP09669 75 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 SPANXDQ9BXN6 97 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 U3KQK5 164 aa7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 USP9XQ93008 2570 aaPredicted RBP7.12□□□□□ -1.27
RBFOX1-201ENST00000311745 G3V318 75 aa7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 USP24Q9UPU5 2620 aa7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 ZANQ9Y493 2812 aa7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 HIST1H4AP62805 103 aaKnown RBP7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 LAGE3Q14657 143 aa7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 LYPD1Q8N2G4 141 aa7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 SPTBN1Q01082 2364 aaKnown RBP7.11□□□□□ -1.27
RBFOX1-201ENST00000311745 MAP1AP78559 2803 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms